Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1177733	1177786	54	2 [0]	[0] 9	sppA	protease IV

TGAACTGGCAGCAGCCCGGGCAGCGGGTAAGCCTGTGGTTGTATC  >  minE/1177688‑1177732                                             | tGAACTGGCAGCAGCCCGGGCAGCGGGTAAGCCTGTGGTTGTATc  >  1:1533881/1‑45 (MQ=255) tGAACTGGCAGCAGCCCGGGCAGCGGGTAAGCCTGTGGTTGTATc  >  1:1898034/1‑45 (MQ=255)                                             | TGAACTGGCAGCAGCCCGGGCAGCGGGTAAGCCTGTGGTTGTATC  >  minE/1177688‑1177732

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑