Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1411581	1411588	8	24 [0]	[0] 7	rsuA	16S rRNA pseudouridylate 516 synthase

CACCAGATAGGTCTTCTCGCAATGATGGCGCGGAGAAGTAATGCGGTGCGACCACTGACCATCATCA  >  minE/1411514‑1411580                                                                   | cACCAGATAGGTCTTCTCGCAATGATGGCGCGGAGAAGTAATGCGGTGCGACCACTGACCAtcatca  >  1:1737705/1‑67 (MQ=255) cACCAGATAGGTCTTCTCGCAATGATGGCGCGGAGAAGTAATGCGGTGCGACCACTGACCAtcatca  >  1:950374/1‑67 (MQ=255) cACCAGATAGGTCTTCTCGCAATGATGGCGCGGAGAAGTAATGCGGTGCGACCACTGACCAtcatca  >  1:877139/1‑67 (MQ=255) cACCAGATAGGTCTTCTCGCAATGATGGCGCGGAGAAGTAATGCGGTGCGACCACTGACCAtcatca  >  1:755164/1‑67 (MQ=255) cACCAGATAGGTCTTCTCGCAATGATGGCGCGGAGAAGTAATGCGGTGCGACCACTGACCAtcatca  >  1:703403/1‑67 (MQ=255) cACCAGATAGGTCTTCTCGCAATGATGGCGCGGAGAAGTAATGCGGTGCGACCACTGACCAtcatca  >  1:660343/1‑67 (MQ=255) cACCAGATAGGTCTTCTCGCAATGATGGCGCGGAGAAGTAATGCGGTGCGACCACTGACCAtcatca  >  1:466163/1‑67 (MQ=255) cACCAGATAGGTCTTCTCGCAATGATGGCGCGGAGAAGTAATGCGGTGCGACCACTGACCAtcatca  >  1:376501/1‑67 (MQ=255) cACCAGATAGGTCTTCTCGCAATGATGGCGCGGAGAAGTAATGCGGTGCGACCACTGACCAtcatca  >  1:2081989/1‑67 (MQ=255) cACCAGATAGGTCTTCTCGCAATGATGGCGCGGAGAAGTAATGCGGTGCGACCACTGACCAtcatca  >  1:2014989/1‑67 (MQ=255) cACCAGATAGGTCTTCTCGCAATGATGGCGCGGAGAAGTAATGCGGTGCGACCACTGACCAtcatca  >  1:1989333/1‑67 (MQ=255) cACCAGATAGGTCTTCTCGCAATGATGGCGCGGAGAAGTAATGCGGTGCGACCACTGACCAtcatca  >  1:1818669/1‑67 (MQ=255) cACCAGATAGGTCTTCTCGCAATGATGGCGCGGAGAAGTAATGCGGTGCGACCACTGACCAtcatca  >  1:1008099/1‑67 (MQ=255) cACCAGATAGGTCTTCTCGCAATGATGGCGCGGAGAAGTAATGCGGTGCGACCACTGACCAtcatca  >  1:1672941/1‑67 (MQ=255) cACCAGATAGGTCTTCTCGCAATGATGGCGCGGAGAAGTAATGCGGTGCGACCACTGACCAtcatca  >  1:1634435/1‑67 (MQ=255) cACCAGATAGGTCTTCTCGCAATGATGGCGCGGAGAAGTAATGCGGTGCGACCACTGACCAtcatca  >  1:1528280/1‑67 (MQ=255) cACCAGATAGGTCTTCTCGCAATGATGGCGCGGAGAAGTAATGCGGTGCGACCACTGACCAtcatca  >  1:1269909/1‑67 (MQ=255) cACCAGATAGGTCTTCTCGCAATGATGGCGCGGAGAAGTAATGCGGTGCGACCACTGACCAtcatca  >  1:1259718/1‑67 (MQ=255) cACCAGATAGGTCTTCTCGCAATGATGGCGCGGAGAAGTAATGCGGTGCGACCACTGACCAtcatca  >  1:1149129/1‑67 (MQ=255) cACCAGATAGGTCTTCTCGCAATGATGGCGCGGAGAAGTAATGCGGTGCGACCACTGACCAtcatca  >  1:1121182/1‑67 (MQ=255) cACCAGATAGGTCTTCTCGCAATGATGGCGCGGAGAAGTAATGCGGTGCGACCACTGACCAtcatca  >  1:1118870/1‑67 (MQ=255) cACCAGATAGGTCTTCTCGCAATGATGGCGCGGAGAAGTAATGCGGTGCGACCACTGACCAtcatca  >  1:1067634/1‑67 (MQ=255) cACCAGATAGGTCTTCTCGCAATGATGGCGCGGAGAAGTAATGCGGTGCGACCACTGACCAtcatca  >  1:1064269/1‑67 (MQ=255) cACCAGATAGGTCTTCTCGCAATGATGGCGCGGAGAAGTAATGCGGTGCGACCACTGACCAtcatca  >  1:1052053/1‑67 (MQ=255)                                                                   | CACCAGATAGGTCTTCTCGCAATGATGGCGCGGAGAAGTAATGCGGTGCGACCACTGACCATCATCA  >  minE/1411514‑1411580

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑