Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1441089	1441137	49	3 [1]	[0] 3	rcsD	phosphotransfer intermediate protein in two‑component regulatory system with RcsBC

CAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCCGCTTCTTTTTACTGTTGATCA  >  minE/1441046‑1441121                                           |                                  cAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCgg                                   <  1:1513950/43‑1 (MQ=255)   gAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCgg                                   <  1:287889/41‑1 (MQ=255)          aCAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCCGCTTCTTTTTACTGTTGATCa  >  1:1588056/1‑67 (MQ=255)                                           |                                  CAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCCGCTTCTTTTTACTGTTGATCA  >  minE/1441046‑1441121

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑