Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1568182	1568188	7	45 [0]	[0] 3	mntH	manganese/divalent cation transporter

AACCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGT  >  minE/1568115‑1568181                                                                   | aacTAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGt  <  1:1073876/67‑1 (MQ=255) aacCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGt  <  1:251721/67‑1 (MQ=255) aacCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGt  <  1:1146891/67‑1 (MQ=255) aacCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGt  <  1:251857/67‑1 (MQ=255) aacCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGt  <  1:307660/67‑1 (MQ=255) aacCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGt  <  1:342919/67‑1 (MQ=255) aacCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGt  <  1:345828/67‑1 (MQ=255) aacCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGt  <  1:369151/67‑1 (MQ=255) aacCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGt  <  1:373074/67‑1 (MQ=255) aacCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGt  <  1:451007/67‑1 (MQ=255) aacCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGt  <  1:576358/67‑1 (MQ=255) aacCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGt  <  1:584543/67‑1 (MQ=255) aacCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGt  <  1:608429/67‑1 (MQ=255) aacCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGt  <  1:657609/67‑1 (MQ=255) aacCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGt  <  1:666194/67‑1 (MQ=255) aacCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGt  <  1:692399/67‑1 (MQ=255) aacCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGt  <  1:751112/67‑1 (MQ=255) aacCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGt  <  1:791455/67‑1 (MQ=255) aacCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGt  <  1:805133/67‑1 (MQ=255) aacCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGt  <  1:809296/67‑1 (MQ=255) aacCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGt  <  1:854907/67‑1 (MQ=255) aacCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGt  <  1:897366/67‑1 (MQ=255) aacCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGt  <  1:1689803/67‑1 (MQ=255) aacCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGt  <  1:116359/67‑1 (MQ=255) aacCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGt  <  1:1165509/67‑1 (MQ=255) aacCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGt  <  1:1222250/67‑1 (MQ=255) aacCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGt  <  1:1262910/67‑1 (MQ=255) aacCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGt  <  1:1308253/67‑1 (MQ=255) aacCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGt  <  1:1370479/67‑1 (MQ=255) aacCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGt  <  1:1420591/67‑1 (MQ=255) aacCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGt  <  1:1431103/67‑1 (MQ=255) aacCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGt  <  1:1456095/67‑1 (MQ=255) aacCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGt  <  1:1500914/67‑1 (MQ=255) aacCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGt  <  1:1686980/67‑1 (MQ=255) aacCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGt  <  1:1764130/67‑1 (MQ=255) aacCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGt  <  1:1866588/67‑1 (MQ=255) aacCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGt  <  1:1868685/67‑1 (MQ=255) aacCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGt  <  1:1971147/67‑1 (MQ=255) aacCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGt  <  1:1981618/67‑1 (MQ=255) aacCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGt  <  1:1990840/67‑1 (MQ=255) aacCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTATACGCGTTTGCTGt  <  1:1949506/67‑1 (MQ=255)  acCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGt  <  1:2015318/66‑1 (MQ=255)  acCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGt  <  1:2076820/66‑1 (MQ=255)        tatTCAGCGCCTCGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGt  <  1:358238/60‑1 (MQ=255)                             ccacAATCACCCAGCCTGTCTGTTTTACTCGTTTGCTGt  <  1:1797003/39‑1 (MQ=255)                                                                   | AACCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGT  >  minE/1568115‑1568181

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑