Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1701141	1701233	93	2 [0]	[1] 11	hcaR	DNA‑binding transcriptional regulator

TGGTTCGTCAAAAAGCTCCAGATAATCAATCTCCGGGCTATAAACAG  >  minE/1701094‑1701140                                               | tGGTTCGTCAAAAAGCTCCAGATAATCAATCTCCGGGCTATAAACAg  >  1:1261646/1‑47 (MQ=255) tGGTTCGTCAAAAAGCTCCAGATAATCAATCTCCGGGCTATAAACAg  >  1:214393/1‑47 (MQ=255)                                               | TGGTTCGTCAAAAAGCTCCAGATAATCAATCTCCGGGCTATAAACAG  >  minE/1701094‑1701140

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑