Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1839976	1840008	33	56 [0]	[0] 38	truD	pseudoruidine synthase

CCCCGTCATCATTACTCAGCAATATGCGCATAATCACCTGTTGTGTTGATAAGTTCCCTGACAACGC  >  minE/1839909‑1839975                                                                   | ccccGTCATCATTACTCAGCAATATGCGCATAATCACCTGTTGTGTTGATAAGTTGCCTGACAACGc  <  1:2088289/67‑1 (MQ=255) ccccGTCATCATTACTCAGCAATATGCGCATAATCACCTGTTGTGTTGATAAGTTCCCTGACAACGc  <  1:378654/67‑1 (MQ=255) ccccGTCATCATTACTCAGCAATATGCGCATAATCACCTGTTGTGTTGATAAGTTCCCTGACAACGc  <  1:1953568/67‑1 (MQ=255) ccccGTCATCATTACTCAGCAATATGCGCATAATCACCTGTTGTGTTGATAAGTTCCCTGACAACGc  <  1:1989195/67‑1 (MQ=255) ccccGTCATCATTACTCAGCAATATGCGCATAATCACCTGTTGTGTTGATAAGTTCCCTGACAACGc  <  1:199714/67‑1 (MQ=255) ccccGTCATCATTACTCAGCAATATGCGCATAATCACCTGTTGTGTTGATAAGTTCCCTGACAACGc  <  1:2027445/67‑1 (MQ=255) ccccGTCATCATTACTCAGCAATATGCGCATAATCACCTGTTGTGTTGATAAGTTCCCTGACAACGc  <  1:207452/67‑1 (MQ=255) ccccGTCATCATTACTCAGCAATATGCGCATAATCACCTGTTGTGTTGATAAGTTCCCTGACAACGc  <  1:2156996/67‑1 (MQ=255) ccccGTCATCATTACTCAGCAATATGCGCATAATCACCTGTTGTGTTGATAAGTTCCCTGACAACGc  <  1:226133/67‑1 (MQ=255) ccccGTCATCATTACTCAGCAATATGCGCATAATCACCTGTTGTGTTGATAAGTTCCCTGACAACGc  <  1:248524/67‑1 (MQ=255) ccccGTCATCATTACTCAGCAATATGCGCATAATCACCTGTTGTGTTGATAAGTTCCCTGACAACGc  <  1:299848/67‑1 (MQ=255) ccccGTCATCATTACTCAGCAATATGCGCATAATCACCTGTTGTGTTGATAAGTTCCCTGACAACGc  <  1:304040/67‑1 (MQ=255) ccccGTCATCATTACTCAGCAATATGCGCATAATCACCTGTTGTGTTGATAAGTTCCCTGACAACGc  <  1:369941/67‑1 (MQ=255) ccccGTCATCATTACTCAGCAATATGCGCATAATCACCTGTTGTGTTGATAAGTTCCCTGACAACGc  <  1:1877464/67‑1 (MQ=255) ccccGTCATCATTACTCAGCAATATGCGCATAATCACCTGTTGTGTTGATAAGTTCCCTGACAACGc  <  1:397041/67‑1 (MQ=255) ccccGTCATCATTACTCAGCAATATGCGCATAATCACCTGTTGTGTTGATAAGTTCCCTGACAACGc  >  1:492408/1‑67 (MQ=255) ccccGTCATCATTACTCAGCAATATGCGCATAATCACCTGTTGTGTTGATAAGTTCCCTGACAACGc  <  1:498838/67‑1 (MQ=255) ccccGTCATCATTACTCAGCAATATGCGCATAATCACCTGTTGTGTTGATAAGTTCCCTGACAACGc  >  1:521155/1‑67 (MQ=255) ccccGTCATCATTACTCAGCAATATGCGCATAATCACCTGTTGTGTTGATAAGTTCCCTGACAACGc  <  1:553065/67‑1 (MQ=255) ccccGTCATCATTACTCAGCAATATGCGCATAATCACCTGTTGTGTTGATAAGTTCCCTGACAACGc  <  1:570700/67‑1 (MQ=255) ccccGTCATCATTACTCAGCAATATGCGCATAATCACCTGTTGTGTTGATAAGTTCCCTGACAACGc  <  1:579774/67‑1 (MQ=255) ccccGTCATCATTACTCAGCAATATGCGCATAATCACCTGTTGTGTTGATAAGTTCCCTGACAACGc  <  1:660996/67‑1 (MQ=255) ccccGTCATCATTACTCAGCAATATGCGCATAATCACCTGTTGTGTTGATAAGTTCCCTGACAACGc  <  1:822961/67‑1 (MQ=255) ccccGTCATCATTACTCAGCAATATGCGCATAATCACCTGTTGTGTTGATAAGTTCCCTGACAACGc  <  1:791784/67‑1 (MQ=255) ccccGTCATCATTACTCAGCAATATGCGCATAATCACCTGTTGTGTTGATAAGTTCCCTGACAACGc  <  1:79426/67‑1 (MQ=255) ccccGTCATCATTACTCAGCAATATGCGCATAATCACCTGTTGTGTTGATAAGTTCCCTGACAACGc  <  1:1387479/67‑1 (MQ=255) ccccGTCATCATTACTCAGCAATATGCGCATAATCACCTGTTGTGTTGATAAGTTCCCTGACAACGc  <  1:1000387/67‑1 (MQ=255) ccccGTCATCATTACTCAGCAATATGCGCATAATCACCTGTTGTGTTGATAAGTTCCCTGACAACGc  <  1:1099167/67‑1 (MQ=255) ccccGTCATCATTACTCAGCAATATGCGCATAATCACCTGTTGTGTTGATAAGTTCCCTGACAACGc  <  1:1124470/67‑1 (MQ=255) ccccGTCATCATTACTCAGCAATATGCGCATAATCACCTGTTGTGTTGATAAGTTCCCTGACAACGc  <  1:1185022/67‑1 (MQ=255) ccccGTCATCATTACTCAGCAATATGCGCATAATCACCTGTTGTGTTGATAAGTTCCCTGACAACGc  <  1:1232284/67‑1 (MQ=255) ccccGTCATCATTACTCAGCAATATGCGCATAATCACCTGTTGTGTTGATAAGTTCCCTGACAACGc  <  1:1260858/67‑1 (MQ=255) ccccGTCATCATTACTCAGCAATATGCGCATAATCACCTGTTGTGTTGATAAGTTCCCTGACAACGc  <  1:1276245/67‑1 (MQ=255) ccccGTCATCATTACTCAGCAATATGCGCATAATCACCTGTTGTGTTGATAAGTTCCCTGACAACGc  <  1:1375085/67‑1 (MQ=255) ccccGTCATCATTACTCAGCAATATGCGCATAATCACCTGTTGTGTTGATAAGTTCCCTGACAACGc  <  1:1380626/67‑1 (MQ=255) ccccGTCATCATTACTCAGCAATATGCGCATAATCACCTGTTGTGTTGATAAGTTCCCTGACAACGc  <  1:138685/67‑1 (MQ=255) ccccGTCATCATTACTCAGCAATATGCGCATAATCACCTGTTGTGTTGATAAGTTCCCTGACAACGc  <  1:1387101/67‑1 (MQ=255) ccccGTCATCATTACTCAGCAATATGCGCATAATCACCTGTTGTGTTGATAAGTTCCCTGACAACGc  <  1:919978/67‑1 (MQ=255) ccccGTCATCATTACTCAGCAATATGCGCATAATCACCTGTTGTGTTGATAAGTTCCCTGACAACGc  >  1:1487860/1‑67 (MQ=255) ccccGTCATCATTACTCAGCAATATGCGCATAATCACCTGTTGTGTTGATAAGTTCCCTGACAACGc  <  1:1516231/67‑1 (MQ=255) ccccGTCATCATTACTCAGCAATATGCGCATAATCACCTGTTGTGTTGATAAGTTCCCTGACAACGc  <  1:1531652/67‑1 (MQ=255) ccccGTCATCATTACTCAGCAATATGCGCATAATCACCTGTTGTGTTGATAAGTTCCCTGACAACGc  <  1:1534026/67‑1 (MQ=255) ccccGTCATCATTACTCAGCAATATGCGCATAATCACCTGTTGTGTTGATAAGTTCCCTGACAACGc  <  1:1562899/67‑1 (MQ=255) ccccGTCATCATTACTCAGCAATATGCGCATAATCACCTGTTGTGTTGATAAGTTCCCTGACAACGc  <  1:1572071/67‑1 (MQ=255) ccccGTCATCATTACTCAGCAATATGCGCATAATCACCTGTTGTGTTGATAAGTTCCCTGACAACGc  <  1:1587043/67‑1 (MQ=255) ccccGTCATCATTACTCAGCAATATGCGCATAATCACCTGTTGTGTTGATAAGTTCCCTGACAACGc  <  1:1620109/67‑1 (MQ=255) ccccGTCATCATTACTCAGCAATATGCGCATAATCACCTGTTGTGTTGATAAGTTCCCTGACAACGc  <  1:829436/67‑1 (MQ=255) ccccGTCATCATTACTCAGCAATATGCGCATAATCACCTGTTGTGCTGATAAGTTCCCTGACAACGc  <  1:1549298/67‑1 (MQ=255) ccccGACATCATTACTCAGCAATATGCGCATAATCACCTGTTGTGTTGATAAGTTCCCTGACAACGc  <  1:989372/67‑1 (MQ=255)  cccGTCATCATTACTCAGCAATATGCGCATAATCACCTGTTGTGTTGATAAGTTCCCTGACAACGc  <  1:799365/66‑1 (MQ=255)        atcatTACTCAGCAATATGCGCATAATCACCTGTTGTGTTGATAAGTTCCCTGACAACGc  <  1:666507/60‑1 (MQ=255)        atcatTACTCAGCAATATGCGCATAATCACCTGTTGTGTTGATAAGTTCCCTGACAACGc  <  1:1398881/60‑1 (MQ=255)              aCTCAGCAATATGCGCATAATCACCTGTTGTGTTGATAAGTTCCCTGACAACGc  <  1:1066869/54‑1 (MQ=255)                 cAGCAATATGCGCATAATCACCTGTTGTGTTGATAAGTTCCCTGACAACGc  <  1:923485/51‑1 (MQ=255)                      atatGCGCATAATCACCTGTTGTGTTGATAAGTTCCCTGACAACGc  <  1:840787/46‑1 (MQ=255)                          gcgcATAATCACCTGTTGTGTTGATAAGTTCCCTGACAACGc  <  1:1807523/42‑1 (MQ=255)                                                                   | CCCCGTCATCATTACTCAGCAATATGCGCATAATCACCTGTTGTGTTGATAAGTTCCCTGACAACGC  >  minE/1839909‑1839975

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑