Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1938124	1938171	48	12 [0]	[0] 2	xerD	site‑specific tyrosine recombinase

CTAACAAAGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCCG  >  minE/1938057‑1938123                                                                   | cTAACAAAGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACTCCcg  <  1:277597/67‑1 (MQ=255) cTAACAAAGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCcg  <  1:1044073/67‑1 (MQ=255) cTAACAAAGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCcg  <  1:1147105/67‑1 (MQ=255) cTAACAAAGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCcg  <  1:1213379/67‑1 (MQ=255) cTAACAAAGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCcg  <  1:1710875/67‑1 (MQ=255) cTAACAAAGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCcg  <  1:1856264/67‑1 (MQ=255) cTAACAAAGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCcg  <  1:1954913/67‑1 (MQ=255) cTAACAAAGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCcg  <  1:2110798/67‑1 (MQ=255) cTAACAAAGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCcg  <  1:261258/67‑1 (MQ=255) cTAACAAAGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCcg  <  1:344947/67‑1 (MQ=255) cTAACAAAGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCcg  <  1:808600/67‑1 (MQ=255) cTAACAAAGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCcg  <  1:834250/67‑1 (MQ=255)                                                                   | CTAACAAAGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCCG  >  minE/1938057‑1938123

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑