Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2256981	2256996	16	51 [0]	[0] 7	rpoC	RNA polymerase, beta prime subunit

CGGCTTTTTAACTTCACCGAAAGACCATGAACGGATCATGTCTGGCGAAGCCAGAGCAATTTTGAT  >  minE/2256915‑2256980                                                                  | cGGCTTTTTAACTTCACCGTAAGACCATGAACGGATCATGTCTGGCGAAGCCAGAGCAATTTTGAt  <  1:931093/66‑1 (MQ=255) cGGCTTTTTAACTTCACCGAAAGACCATGAACGGATCATGTCTGGCGAAGCCAGAGCAATTTTGAt  <  1:292451/66‑1 (MQ=255) cGGCTTTTTAACTTCACCGAAAGACCATGAACGGATCATGTCTGGCGAAGCCAGAGCAATTTTGAt  <  1:1740028/66‑1 (MQ=255) cGGCTTTTTAACTTCACCGAAAGACCATGAACGGATCATGTCTGGCGAAGCCAGAGCAATTTTGAt  <  1:1757210/66‑1 (MQ=255) cGGCTTTTTAACTTCACCGAAAGACCATGAACGGATCATGTCTGGCGAAGCCAGAGCAATTTTGAt  <  1:1759761/66‑1 (MQ=255) cGGCTTTTTAACTTCACCGAAAGACCATGAACGGATCATGTCTGGCGAAGCCAGAGCAATTTTGAt  <  1:1779097/66‑1 (MQ=255) cGGCTTTTTAACTTCACCGAAAGACCATGAACGGATCATGTCTGGCGAAGCCAGAGCAATTTTGAt  <  1:1834153/66‑1 (MQ=255) cGGCTTTTTAACTTCACCGAAAGACCATGAACGGATCATGTCTGGCGAAGCCAGAGCAATTTTGAt  <  1:1884924/66‑1 (MQ=255) cGGCTTTTTAACTTCACCGAAAGACCATGAACGGATCATGTCTGGCGAAGCCAGAGCAATTTTGAt  <  1:1988318/66‑1 (MQ=255) cGGCTTTTTAACTTCACCGAAAGACCATGAACGGATCATGTCTGGCGAAGCCAGAGCAATTTTGAt  <  1:223470/66‑1 (MQ=255) cGGCTTTTTAACTTCACCGAAAGACCATGAACGGATCATGTCTGGCGAAGCCAGAGCAATTTTGAt  <  1:27583/66‑1 (MQ=255) cGGCTTTTTAACTTCACCGAAAGACCATGAACGGATCATGTCTGGCGAAGCCAGAGCAATTTTGAt  <  1:1072110/66‑1 (MQ=255) cGGCTTTTTAACTTCACCGAAAGACCATGAACGGATCATGTCTGGCGAAGCCAGAGCAATTTTGAt  <  1:440597/66‑1 (MQ=255) cGGCTTTTTAACTTCACCGAAAGACCATGAACGGATCATGTCTGGCGAAGCCAGAGCAATTTTGAt  <  1:44739/66‑1 (MQ=255) cGGCTTTTTAACTTCACCGAAAGACCATGAACGGATCATGTCTGGCGAAGCCAGAGCAATTTTGAt  <  1:597135/66‑1 (MQ=255) cGGCTTTTTAACTTCACCGAAAGACCATGAACGGATCATGTCTGGCGAAGCCAGAGCAATTTTGAt  <  1:673173/66‑1 (MQ=255) cGGCTTTTTAACTTCACCGAAAGACCATGAACGGATCATGTCTGGCGAAGCCAGAGCAATTTTGAt  <  1:726501/66‑1 (MQ=255) cGGCTTTTTAACTTCACCGAAAGACCATGAACGGATCATGTCTGGCGAAGCCAGAGCAATTTTGAt  <  1:884822/66‑1 (MQ=255) cGGCTTTTTAACTTCACCGAAAGACCATGAACGGATCATGTCTGGCGAAGCCAGAGCAATTTTGAt  <  1:926803/66‑1 (MQ=255) cGGCTTTTTAACTTCACCGAAAGACCATGAACGGATCATGTCTGGCGAAGCCAGAGCAATTTTGAt  <  1:958665/66‑1 (MQ=255) cGGCTTTTTAACTTCACCGAAAGACCATGAACGGATCATGTCTGGCGAAGCCAGAGCAATTTTGAt  <  1:172233/66‑1 (MQ=255) cGGCTTTTTAACTTCACCGAAAGACCATGAACGGATCATGTCTGGCGAAGCCAGAGCAATTTTGAt  <  1:1315462/66‑1 (MQ=255) cGGCTTTTTAACTTCACCGAAAGACCATGAACGGATCATGTCTGGCGAAGCCAGAGCAATTTTGAt  <  1:1287290/66‑1 (MQ=255) cGGCTTTTTAACTTCACCGAAAGACCATGAACGGATCATGTCTGGCGAAGCCAGAGCAATTTTGAt  <  1:1402038/66‑1 (MQ=255) cGGCTTTTTAACTTCACCGAAAGACCATGAACGGATCATGTCTGGCGAAGCCAGAGCAATTTTGAt  <  1:1226914/66‑1 (MQ=255) cGGCTTTTTAACTTCACCGAAAGACCATGAACGGATCATGTCTGGCGAAGCCAGAGCAATTTTGAt  <  1:1417447/66‑1 (MQ=255) cGGCTTTTTAACTTCACCGAAAGACCATGAACGGATCATGTCTGGCGAAGCCAGAGCAATTTTGAt  <  1:1157651/66‑1 (MQ=255) cGGCTTTTTAACTTCACCGAAAGACCATGAACGGATCATGTCTGGCGAAGCCAGAGCAATTTTGAt  <  1:1503111/66‑1 (MQ=255) cGGCTTTTTAACTTCACCGAAAGACCATGAACGGATCATGTCTGGCGAAGCCAGAGCAATTTTGAt  <  1:1550608/66‑1 (MQ=255) cGGCTTTTTAACTTCACCGAAAGACCATGAACGGATCATGTCTGGCGAAGCCAGAGCAATTTTGAt  <  1:1114931/66‑1 (MQ=255) cGGCTTTTTAACTTCACCGAAAGACCATGAACGGATCATGTCTGGCGAAGCCAGAGCAATTTTGAt  <  1:1730541/66‑1 (MQ=255) cGGCTTTTTAACTTCACCGAAAGACCATGAACGGATCATGTCTGGCGAAGCCAGAGCAATTTTGAt  <  1:1653236/66‑1 (MQ=255) cGGCTTTTTAACTTCACCGAAAGACCATGAACGGATCATGTCTGGCGAAGCCAGAGCAATTTTGAt  <  1:1710127/66‑1 (MQ=255) cGGCTTTTTAACATCACCGAAAGACCATGAACGGATCATGTCTGGCGAAGCCAGAGCAATTTTGAt  <  1:1538384/66‑1 (MQ=255)  ggCTTTTTAACTTCACCGAAAGACCATGAACGGATCATGTCTGGCGAAGCCAGAGCAATTTTGAt  <  1:934206/65‑1 (MQ=255)  ggCTTTTTAACTTCACCGAAAGACCATGAACGGATCATGTCTGGCGAAGCCAGAGCAATTTTGAt  <  1:699250/65‑1 (MQ=255)  ggCTTTTTAACTTCACCGAAAGACCATGAACGGATCATGTCTGGCGAAGCCAGAGCAATTTTGAt  <  1:695442/65‑1 (MQ=255)  ggCTTTTTAACTTCACCGAAAGACCATGAACGGATCATGTCTGGCGAAGCCAGAGCAATTTTGAt  <  1:1064089/65‑1 (MQ=255)  ggCTTTTTAACTTCACCGAAAGACCATGAACGGATCATGTCTGGCGAAGCCAGAGCAATTTTGAt  <  1:538040/65‑1 (MQ=255)  ggCTTTTTAACTTCACCGAAAGACCATGAACGGATCATGTCTGGCGAAGCCAGAGCAATTTTGAt  <  1:534336/65‑1 (MQ=255)  ggCTTTTTAACTTCACCGAAAGACCATGAACGGATCATGTCTGGCGAAGCCAGAGCAATTTTGAt  <  1:483006/65‑1 (MQ=255)  ggCTTTTTAACTTCACCGAAAGACCATGAACGGATCATGTCTGGCGAAGCCAGAGCAATTTTGAt  <  1:480627/65‑1 (MQ=255)  ggCTTTTTAACTTCACCGAAAGACCATGAACGGATCATGTCTGGCGAAGCCAGAGCAATTTTGAt  <  1:1328405/65‑1 (MQ=255)  ggCTTTTTAACTTCACCGAAAGACCATGAACGGATCATGTCTGGCGAAGCCAGAGCAATTTTGAt  <  1:1475664/65‑1 (MQ=255)  ggCTTTTTAACTTCACCGAAAGACCATGAACGGATCATGTCTGGCGAAGCCAGAGCAATTTTGAt  <  1:1573388/65‑1 (MQ=255)  ggCTTTTTAACTTCACCGAAAGACCATGAACGGATCATGTCTGGCGAAGCCAGAGCAATTTTGAt  <  1:1811638/65‑1 (MQ=255)  ggCTTTTTAACTTCACCGAAAGACCATGAACGGATCATGTCTGGCGAAGCCAGAGCAATTTTGAt  <  1:163121/65‑1 (MQ=255)   gCTTTTTAACTTCACCGAAAGACCATGAACGGATCATGTCTGGCGAAGCCAGAGCAATTTTGAt  <  1:1237633/64‑1 (MQ=255)               cACCGAAAGACCATGAACGGATCATGTCTGGCGAAGCCAGAGCAATTTTGAt  <  1:878366/52‑1 (MQ=255)                      aGACCATGAACGGATCATGTCTGGCGAAGCCAGAGCAATTTTGAt  <  1:319423/45‑1 (MQ=255)                          cATGAACGGATCATGTCTGGCGAAGCCAGAGCAATTTTGAt  <  1:482475/41‑1 (MQ=255)                                                                  | CGGCTTTTTAACTTCACCGAAAGACCATGAACGGATCATGTCTGGCGAAGCCAGAGCAATTTTGAT  >  minE/2256915‑2256980

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑