Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2482584	2482599	16	64 [0]	[0] 17	mdtL	multidrug efflux system protein

AAAATAGCGAACGCCACTACGTAACAACAGCCTGCGCCCAACCCCTGTAGAAATCGGCCTGCAAGAA  >  minE/2482517‑2482583                                                                   | aaaaTAGCGAACGCCACTACGTAACAACAGCCTGCGCCCAACCCCTGTAGAAATCGGCCTGCAAGaa  <  1:393613/67‑1 (MQ=255) aaaaTAGCGAACGCCACTACGTAACAACAGCCTGCGCCCAACCCCTGTAGAAATCGGCCTGCAAGaa  <  1:2069544/67‑1 (MQ=255) aaaaTAGCGAACGCCACTACGTAACAACAGCCTGCGCCCAACCCCTGTAGAAATCGGCCTGCAAGaa  <  1:2103508/67‑1 (MQ=255) aaaaTAGCGAACGCCACTACGTAACAACAGCCTGCGCCCAACCCCTGTAGAAATCGGCCTGCAAGaa  <  1:1053212/67‑1 (MQ=255) aaaaTAGCGAACGCCACTACGTAACAACAGCCTGCGCCCAACCCCTGTAGAAATCGGCCTGCAAGaa  <  1:2156106/67‑1 (MQ=255) aaaaTAGCGAACGCCACTACGTAACAACAGCCTGCGCCCAACCCCTGTAGAAATCGGCCTGCAAGaa  <  1:254512/67‑1 (MQ=255) aaaaTAGCGAACGCCACTACGTAACAACAGCCTGCGCCCAACCCCTGTAGAAATCGGCCTGCAAGaa  <  1:260832/67‑1 (MQ=255) aaaaTAGCGAACGCCACTACGTAACAACAGCCTGCGCCCAACCCCTGTAGAAATCGGCCTGCAAGaa  <  1:266459/67‑1 (MQ=255) aaaaTAGCGAACGCCACTACGTAACAACAGCCTGCGCCCAACCCCTGTAGAAATCGGCCTGCAAGaa  <  1:267439/67‑1 (MQ=255) aaaaTAGCGAACGCCACTACGTAACAACAGCCTGCGCCCAACCCCTGTAGAAATCGGCCTGCAAGaa  <  1:275360/67‑1 (MQ=255) aaaaTAGCGAACGCCACTACGTAACAACAGCCTGCGCCCAACCCCTGTAGAAATCGGCCTGCAAGaa  <  1:27839/67‑1 (MQ=255) aaaaTAGCGAACGCCACTACGTAACAACAGCCTGCGCCCAACCCCTGTAGAAATCGGCCTGCAAGaa  <  1:298358/67‑1 (MQ=255) aaaaTAGCGAACGCCACTACGTAACAACAGCCTGCGCCCAACCCCTGTAGAAATCGGCCTGCAAGaa  <  1:324608/67‑1 (MQ=255) aaaaTAGCGAACGCCACTACGTAACAACAGCCTGCGCCCAACCCCTGTAGAAATCGGCCTGCAAGaa  <  1:326120/67‑1 (MQ=255) aaaaTAGCGAACGCCACTACGTAACAACAGCCTGCGCCCAACCCCTGTAGAAATCGGCCTGCAAGaa  <  1:345285/67‑1 (MQ=255) aaaaTAGCGAACGCCACTACGTAACAACAGCCTGCGCCCAACCCCTGTAGAAATCGGCCTGCAAGaa  <  1:2105597/67‑1 (MQ=255) aaaaTAGCGAACGCCACTACGTAACAACAGCCTGCGCCCAACCCCTGTAGAAATCGGCCTGCAAGaa  <  1:51663/67‑1 (MQ=255) aaaaTAGCGAACGCCACTACGTAACAACAGCCTGCGCCCAACCCCTGTAGAAATCGGCCTGCAAGaa  <  1:562248/67‑1 (MQ=255) aaaaTAGCGAACGCCACTACGTAACAACAGCCTGCGCCCAACCCCTGTAGAAATCGGCCTGCAAGaa  <  1:571802/67‑1 (MQ=255) aaaaTAGCGAACGCCACTACGTAACAACAGCCTGCGCCCAACCCCTGTAGAAATCGGCCTGCAAGaa  <  1:576399/67‑1 (MQ=255) aaaaTAGCGAACGCCACTACGTAACAACAGCCTGCGCCCAACCCCTGTAGAAATCGGCCTGCAAGaa  <  1:612510/67‑1 (MQ=255) aaaaTAGCGAACGCCACTACGTAACAACAGCCTGCGCCCAACCCCTGTAGAAATCGGCCTGCAAGaa  <  1:705639/67‑1 (MQ=255) aaaaTAGCGAACGCCACTACGTAACAACAGCCTGCGCCCAACCCCTGTAGAAATCGGCCTGCAAGaa  <  1:786964/67‑1 (MQ=255) aaaaTAGCGAACGCCACTACGTAACAACAGCCTGCGCCCAACCCCTGTAGAAATCGGCCTGCAAGaa  <  1:791729/67‑1 (MQ=255) aaaaTAGCGAACGCCACTACGTAACAACAGCCTGCGCCCAACCCCTGTAGAAATCGGCCTGCAAGaa  <  1:799105/67‑1 (MQ=255) aaaaTAGCGAACGCCACTACGTAACAACAGCCTGCGCCCAACCCCTGTAGAAATCGGCCTGCAAGaa  <  1:802049/67‑1 (MQ=255) aaaaTAGCGAACGCCACTACGTAACAACAGCCTGCGCCCAACCCCTGTAGAAATCGGCCTGCAAGaa  <  1:853531/67‑1 (MQ=255) aaaaTAGCGAACGCCACTACGTAACAACAGCCTGCGCCCAACCCCTGTAGAAATCGGCCTGCAAGaa  <  1:889927/67‑1 (MQ=255) aaaaTAGCGAACGCCACTACGTAACAACAGCCTGCGCCCAACCCCTGTAGAAATCGGCCTGCAAGaa  <  1:956600/67‑1 (MQ=255) aaaaTAGCGAACGCCACTACGTAACAACAGCCTGCGCCCAACCCCTGTAGAAATCGGCCTGCAAGaa  <  1:960076/67‑1 (MQ=255) aaaaTAGCGAACGCCACTACGTAACAACAGCCTGCGCCCAACCCCTGTAGAAATCGGCCTGCAAGaa  <  1:1482518/67‑1 (MQ=255) aaaaTAGCGAACGCCACTACGTAACAACAGCCTGCGCCCAACCCCTGTAGAAATCGGCCTGCAAGaa  <  1:1075897/67‑1 (MQ=255) aaaaTAGCGAACGCCACTACGTAACAACAGCCTGCGCCCAACCCCTGTAGAAATCGGCCTGCAAGaa  <  1:1091734/67‑1 (MQ=255) aaaaTAGCGAACGCCACTACGTAACAACAGCCTGCGCCCAACCCCTGTAGAAATCGGCCTGCAAGaa  <  1:1211868/67‑1 (MQ=255) aaaaTAGCGAACGCCACTACGTAACAACAGCCTGCGCCCAACCCCTGTAGAAATCGGCCTGCAAGaa  <  1:1214234/67‑1 (MQ=255) aaaaTAGCGAACGCCACTACGTAACAACAGCCTGCGCCCAACCCCTGTAGAAATCGGCCTGCAAGaa  <  1:1217798/67‑1 (MQ=255) aaaaTAGCGAACGCCACTACGTAACAACAGCCTGCGCCCAACCCCTGTAGAAATCGGCCTGCAAGaa  <  1:1269207/67‑1 (MQ=255) aaaaTAGCGAACGCCACTACGTAACAACAGCCTGCGCCCAACCCCTGTAGAAATCGGCCTGCAAGaa  <  1:1310383/67‑1 (MQ=255) aaaaTAGCGAACGCCACTACGTAACAACAGCCTGCGCCCAACCCCTGTAGAAATCGGCCTGCAAGaa  <  1:1315060/67‑1 (MQ=255) aaaaTAGCGAACGCCACTACGTAACAACAGCCTGCGCCCAACCCCTGTAGAAATCGGCCTGCAAGaa  <  1:1364778/67‑1 (MQ=255) aaaaTAGCGAACGCCACTACGTAACAACAGCCTGCGCCCAACCCCTGTAGAAATCGGCCTGCAAGaa  <  1:1384911/67‑1 (MQ=255) aaaaTAGCGAACGCCACTACGTAACAACAGCCTGCGCCCAACCCCTGTAGAAATCGGCCTGCAAGaa  <  1:1414756/67‑1 (MQ=255) aaaaTAGCGAACGCCACTACGTAACAACAGCCTGCGCCCAACCCCTGTAGAAATCGGCCTGCAAGaa  <  1:1427015/67‑1 (MQ=255) aaaaTAGCGAACGCCACTACGTAACAACAGCCTGCGCCCAACCCCTGTAGAAATCGGCCTGCAAGaa  <  1:1431006/67‑1 (MQ=255) aaaaTAGCGAACGCCACTACGTAACAACAGCCTGCGCCCAACCCCTGTAGAAATCGGCCTGCAAGaa  <  1:1570962/67‑1 (MQ=255) aaaaTAGCGAACGCCACTACGTAACAACAGCCTGCGCCCAACCCCTGTAGAAATCGGCCTGCAAGaa  <  1:1834709/67‑1 (MQ=255) aaaaTAGCGAACGCCACTACGTAACAACAGCCTGCGCCCAACCCCTGTAGAAATCGGCCTGCAAGaa  <  1:2010617/67‑1 (MQ=255) aaaaTAGCGAACGCCACTACGTAACAACAGCCTGCGCCCAACCCCTGTAGAAATCGGCCTGCAAGaa  <  1:2003894/67‑1 (MQ=255) aaaaTAGCGAACGCCACTACGTAACAACAGCCTGCGCCCAACCCCTGTAGAAATCGGCCTGCAAGaa  <  1:1879481/67‑1 (MQ=255) aaaaTAGCGAACGCCACTACGTAACAACAGCCTGCGCCCAACCCCTGTAGAAATCGGCCTGCAAGaa  <  1:1857240/67‑1 (MQ=255) aaaaTAGCGAACGCCACTACGTAACAACAGCCTGCGCCCAACCCCTGTAGAAATCGGCCTGCAAGaa  <  1:1856214/67‑1 (MQ=255) aaaaTAGCGAACGCCACTACGTAACAACAGCCTGCGCCCAACCCCTGTAGAAATCGGCCTGCAAGaa  <  1:1853186/67‑1 (MQ=255) aaaaTAGCGAACGCCACTACGTAACAACAGCCTGCGCCCAACCCCTGTAGAAATCGGCCTGCAAGaa  <  1:1837617/67‑1 (MQ=255) aaaaTAGCGAACGCCACTACGTAACAACAGCCTGCGCCCAACCCCTGTAGAAATCGGCCTGCAAGaa  <  1:1694583/67‑1 (MQ=255) aaaaTAGCGAACGCCACTACGTAACAACAGCCTGCGCCCAACCCCTGTAGAAATCGGCCTGCAAGaa  <  1:1831610/67‑1 (MQ=255) aaaaTAGCGAACGCCACTACGTAACAACAGCCTGCGCCCAACCCCTGTAGAAATCGGCCTGCAAGaa  <  1:1706772/67‑1 (MQ=255)  aaaTAGCGAACGCCACTACGTAACAACAGCCTGCGCCCAACCCCTGTAGAAATCGGCCTGCAAGaa  <  1:674001/66‑1 (MQ=255)  aaaTAGCGAACGCCACTACGTAACAACAGCCTGCGCCCAACCCCTGTAGAAATCGGCCTGCAAGaa  <  1:593646/66‑1 (MQ=255)  aaaTAGCGAACGCCACTACGTAACAACAGCCTGCGCCCAACCCCTGTAGAAATCGGCCTGCAAGaa  <  1:852165/66‑1 (MQ=255)  aaaTAGCGAACGCCACTACGTAACAACAGCCTGCGCCCAACCCCTGTAGAAATCGGCCTGCAAGaa  <  1:337327/66‑1 (MQ=255)  aaaTAGCGAACGCCACTACGTAACAACAGCCTGCGCCCAACCCCTGTAGAAATCGGCCTGCAAGaa  <  1:1969586/66‑1 (MQ=255)  aaaTAGCGAACGCCACTACGTAACAACAGCCTGCGCCCAACCCCTGTAGAAATCGGCCTGCAAGaa  <  1:509136/66‑1 (MQ=255)        cGAACGCCACTACGTAACAACAGCCTGCGCCCAACCCCTGTAGAAATCGGCCTGCAAGaa  <  1:1798172/60‑1 (MQ=255)                      tAACAACAGCCTGCGCCCAACCCCTGTAGAAATCGGCCTGCAAGaa  <  1:2056878/46‑1 (MQ=255)                                                                   | AAAATAGCGAACGCCACTACGTAACAACAGCCTGCGCCCAACCCCTGTAGAAATCGGCCTGCAAGAA  >  minE/2482517‑2482583

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑