Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2701376	2701382	7	45 [0]	[0] 12	hofQ	predicted fimbrial transporter

TCACGCCCACGGTGTTACAAAAAGGTCGCATCCGGCTGAAATTACACATCAGCCAGAACGTTCCGGG  >  minE/2701309‑2701375                                                                   | tCACGCCCACGGTGTTACAAAAAGGTCGCATCCGGCTGAAATTACACATCAGCCAGAACGTTCCggg  <  1:597069/67‑1 (MQ=255) tCACGCCCACGGTGTTACAAAAAGGTCGCATCCGGCTGAAATTACACATCAGCCAGAACGTTCCggg  <  1:1945080/67‑1 (MQ=255) tCACGCCCACGGTGTTACAAAAAGGTCGCATCCGGCTGAAATTACACATCAGCCAGAACGTTCCggg  <  1:2085091/67‑1 (MQ=255) tCACGCCCACGGTGTTACAAAAAGGTCGCATCCGGCTGAAATTACACATCAGCCAGAACGTTCCggg  <  1:287611/67‑1 (MQ=255) tCACGCCCACGGTGTTACAAAAAGGTCGCATCCGGCTGAAATTACACATCAGCCAGAACGTTCCggg  <  1:325126/67‑1 (MQ=255) tCACGCCCACGGTGTTACAAAAAGGTCGCATCCGGCTGAAATTACACATCAGCCAGAACGTTCCggg  <  1:386152/67‑1 (MQ=255) tCACGCCCACGGTGTTACAAAAAGGTCGCATCCGGCTGAAATTACACATCAGCCAGAACGTTCCggg  <  1:406624/67‑1 (MQ=255) tCACGCCCACGGTGTTACAAAAAGGTCGCATCCGGCTGAAATTACACATCAGCCAGAACGTTCCggg  <  1:480805/67‑1 (MQ=255) tCACGCCCACGGTGTTACAAAAAGGTCGCATCCGGCTGAAATTACACATCAGCCAGAACGTTCCggg  <  1:494326/67‑1 (MQ=255) tCACGCCCACGGTGTTACAAAAAGGTCGCATCCGGCTGAAATTACACATCAGCCAGAACGTTCCggg  <  1:503351/67‑1 (MQ=255) tCACGCCCACGGTGTTACAAAAAGGTCGCATCCGGCTGAAATTACACATCAGCCAGAACGTTCCggg  <  1:51798/67‑1 (MQ=255) tCACGCCCACGGTGTTACAAAAAGGTCGCATCCGGCTGAAATTACACATCAGCCAGAACGTTCCggg  <  1:1917266/67‑1 (MQ=255) tCACGCCCACGGTGTTACAAAAAGGTCGCATCCGGCTGAAATTACACATCAGCCAGAACGTTCCggg  <  1:599683/67‑1 (MQ=255) tCACGCCCACGGTGTTACAAAAAGGTCGCATCCGGCTGAAATTACACATCAGCCAGAACGTTCCggg  <  1:644639/67‑1 (MQ=255) tCACGCCCACGGTGTTACAAAAAGGTCGCATCCGGCTGAAATTACACATCAGCCAGAACGTTCCggg  <  1:676058/67‑1 (MQ=255) tCACGCCCACGGTGTTACAAAAAGGTCGCATCCGGCTGAAATTACACATCAGCCAGAACGTTCCggg  <  1:703737/67‑1 (MQ=255) tCACGCCCACGGTGTTACAAAAAGGTCGCATCCGGCTGAAATTACACATCAGCCAGAACGTTCCggg  <  1:760436/67‑1 (MQ=255) tCACGCCCACGGTGTTACAAAAAGGTCGCATCCGGCTGAAATTACACATCAGCCAGAACGTTCCggg  <  1:833698/67‑1 (MQ=255) tCACGCCCACGGTGTTACAAAAAGGTCGCATCCGGCTGAAATTACACATCAGCCAGAACGTTCCggg  <  1:885385/67‑1 (MQ=255) tCACGCCCACGGTGTTACAAAAAGGTCGCATCCGGCTGAAATTACACATCAGCCAGAACGTTCCggg  <  1:905176/67‑1 (MQ=255) tCACGCCCACGGTGTTACAAAAAGGTCGCATCCGGCTGAAATTACACATCAGCCAGAACGTTCCggg  <  1:926788/67‑1 (MQ=255) tCACGCCCACGGTGTTACAAAAAGGTCGCATCCGGCTGAAATTACACATCAGCCAGAACGTTCCggg  <  1:987587/67‑1 (MQ=255) tCACGCCCACGGTGTTACAAAAAGGTCGCATCCGGCTGAAATTACACATCAGCCAGAACGTTCCggg  <  1:1468098/67‑1 (MQ=255) tCACGCCCACGGTGTTACAAAAAGGTCGCATCCGGCTGAAATTACACATCAGCCAGAACGTTCCggg  <  1:1095788/67‑1 (MQ=255) tCACGCCCACGGTGTTACAAAAAGGTCGCATCCGGCTGAAATTACACATCAGCCAGAACGTTCCggg  <  1:1162663/67‑1 (MQ=255) tCACGCCCACGGTGTTACAAAAAGGTCGCATCCGGCTGAAATTACACATCAGCCAGAACGTTCCggg  <  1:1195489/67‑1 (MQ=255) tCACGCCCACGGTGTTACAAAAAGGTCGCATCCGGCTGAAATTACACATCAGCCAGAACGTTCCggg  <  1:1213060/67‑1 (MQ=255) tCACGCCCACGGTGTTACAAAAAGGTCGCATCCGGCTGAAATTACACATCAGCCAGAACGTTCCggg  <  1:1246741/67‑1 (MQ=255) tCACGCCCACGGTGTTACAAAAAGGTCGCATCCGGCTGAAATTACACATCAGCCAGAACGTTCCggg  <  1:1281710/67‑1 (MQ=255) tCACGCCCACGGTGTTACAAAAAGGTCGCATCCGGCTGAAATTACACATCAGCCAGAACGTTCCggg  <  1:1298956/67‑1 (MQ=255) tCACGCCCACGGTGTTACAAAAAGGTCGCATCCGGCTGAAATTACACATCAGCCAGAACGTTCCggg  <  1:1301637/67‑1 (MQ=255) tCACGCCCACGGTGTTACAAAAAGGTCGCATCCGGCTGAAATTACACATCAGCCAGAACGTTCCggg  <  1:131313/67‑1 (MQ=255) tCACGCCCACGGTGTTACAAAAAGGTCGCATCCGGCTGAAATTACACATCAGCCAGAACGTTCCggg  <  1:1329126/67‑1 (MQ=255) tCACGCCCACGGTGTTACAAAAAGGTCGCATCCGGCTGAAATTACACATCAGCCAGAACGTTCCggg  <  1:1335520/67‑1 (MQ=255) tCACGCCCACGGTGTTACAAAAAGGTCGCATCCGGCTGAAATTACACATCAGCCAGAACGTTCCggg  <  1:1066656/67‑1 (MQ=255) tCACGCCCACGGTGTTACAAAAAGGTCGCATCCGGCTGAAATTACACATCAGCCAGAACGTTCCggg  <  1:1474650/67‑1 (MQ=255) tCACGCCCACGGTGTTACAAAAAGGTCGCATCCGGCTGAAATTACACATCAGCCAGAACGTTCCggg  <  1:1480314/67‑1 (MQ=255) tCACGCCCACGGTGTTACAAAAAGGTCGCATCCGGCTGAAATTACACATCAGCCAGAACGTTCCggg  <  1:153045/67‑1 (MQ=255) tCACGCCCACGGTGTTACAAAAAGGTCGCATCCGGCTGAAATTACACATCAGCCAGAACGTTCCggg  <  1:1722300/67‑1 (MQ=255) tCACGCCCACGGTGTTACAAAAAGGTCGCATCCGGCTGAAATTACACATCAGCCAGAACGTTCCggg  <  1:1748578/67‑1 (MQ=255) tCACGCCCACGGTGTTACAAAAAGGTCGCATCCGGCTGAAATTACACATCAGCCAGAACGTTCCggg  <  1:184927/67‑1 (MQ=255) tCACGCCCACGGTGTTACAAAAAGGTCGCATCCGGCTGAAATTACACATCAGCCAGAACGTTCCggg  <  1:1909411/67‑1 (MQ=255)  cACGCCCACGGTGTTACAAAAAGGTCGCATCCGGCTGAAATTACACATCAGCCAGAACGTTCCggg  <  1:1497975/66‑1 (MQ=255)  cACGCCCACGGTGTTACAAAAAGGTCGCATCCGGCTGAAATTACACATCAGCCAGAACGTTCCggg  <  1:306689/66‑1 (MQ=255)                              aTCCGGCTGAAATTACACATCAGCCAGAACGTTCCggg  <  1:1632039/38‑1 (MQ=255)                                                                   | TCACGCCCACGGTGTTACAAAAAGGTCGCATCCGGCTGAAATTACACATCAGCCAGAACGTTCCGGG  >  minE/2701309‑2701375

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑