Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	312323	312325	3	18 [0]	[0] 61	acrB	multidrug efflux system protein

CGTACTGTGAACCGAACAACTGAACATCACCCACGCCCGACGTACGGCTGATGGCATCTTTCATATT  >  minE/312326‑312392 |                                                                   cgTACTGTGAACCGAACAACTGAACATCACCCACGCCCGACGTACGGCTGATGGCATCTTTCatat   >  1:1061508/1‑66 (MQ=255) cgTACTGTGAACCGAACAACTGAACATCACCCACGCCCGACGTACGGCTGATGGCATCTTTCatat   >  1:415252/1‑66 (MQ=255) cgTACTGTGAACCGAACAACTGAACATCACCCACGCCCGACGTACGGCTGATGGCATCTTTCatat   >  1:534635/1‑66 (MQ=255) cgTACTGTGAACCGAACAACTGAACATCACCCACGCCCGACGTACGGCTGATGGCATCTTTCATAtt  >  1:361453/1‑67 (MQ=255) cgTACTGTGAACCGAACAACTGAACATCACCCACGCCCGACGTACGGCTGATGGCATCTTTCATAtt  >  1:97000/1‑67 (MQ=255) cgTACTGTGAACCGAACAACTGAACATCACCCACGCCCGACGTACGGCTGATGGCATCTTTCATAtt  >  1:368026/1‑67 (MQ=255) cgTACTGTGAACCGAACAACTGAACATCACCCACGCCCGACGTACGGCTGATGGCATCTTTCATAtt  >  1:385596/1‑67 (MQ=255) cgTACTGTGAACCGAACAACTGAACATCACCCACGCCCGACGTACGGCTGATGGCATCTTTCATAtt  >  1:412778/1‑67 (MQ=255) cgTACTGTGAACCGAACAACTGAACATCACCCACGCCCGACGTACGGCTGATGGCATCTTTCATAtt  >  1:445211/1‑67 (MQ=255) cgTACTGTGAACCGAACAACTGAACATCACCCACGCCCGACGTACGGCTGATGGCATCTTTCATAtt  >  1:44754/1‑67 (MQ=255) cgTACTGTGAACCGAACAACTGAACATCACCCACGCCCGACGTACGGCTGATGGCATCTTTCATAtt  >  1:468397/1‑67 (MQ=255) cgTACTGTGAACCGAACAACTGAACATCACCCACGCCCGACGTACGGCTGATGGCATCTTTCATAtt  >  1:480350/1‑67 (MQ=255) cgTACTGTGAACCGAACAACTGAACATCACCCACGCCCGACGTACGGCTGATGGCATCTTTCATAtt  >  1:508427/1‑67 (MQ=255) cgTACTGTGAACCGAACAACTGAACATCACCCACGCCCGACGTACGGCTGATGGCATCTTTCATAtt  >  1:54028/1‑67 (MQ=255) cgTACTGTGAACCGAACAACTGAACATCACCCACGCCCGACGTACGGCTGATGGCATCTTTCATAtt  >  1:542587/1‑67 (MQ=255) cgTACTGTGAACCGAACAACTGAACATCACCCACGCCCGACGTACGGCTGATGGCATCTTTCATAtt  >  1:551334/1‑67 (MQ=255) cgTACTGTGAACCGAACAACTGAACATCACCCACGCCCGACGTACGGCTGATGGCATCTTTCATAtt  >  1:605209/1‑67 (MQ=255) cgTACTGTGAACCGAACAACTGAACATCACCCACGCCCGACGTACGGCTGATGGCATCTTTCATAtt  >  1:614486/1‑67 (MQ=255) cgTACTGTGAACCGAACAACTGAACATCACCCACGCCCGACGTACGGCTGATGGCATCTTTCATAtt  >  1:625684/1‑67 (MQ=255) cgTACTGTGAACCGAACAACTGAACATCACCCACGCCCGACGTACGGCTGATGGCATCTTTCATAtt  >  1:633458/1‑67 (MQ=255) cgTACTGTGAACCGAACAACTGAACATCACCCACGCCCGACGTACGGCTGATGGCATCTTTCATAtt  >  1:729316/1‑67 (MQ=255) cgTACTGTGAACCGAACAACTGAACATCACCCACGCCCGACGTACGGCTGATGGCATCTTTCATAtt  >  1:766214/1‑67 (MQ=255) cgTACTGTGAACCGAACAACTGAACATCACCCACGCCCGACGTACGGCTGATGGCATCTTTCATAtt  >  1:803207/1‑67 (MQ=255) cgTACTGTGAACCGAACAACTGAACATCACCCACGCCCGACGTACGGCTGATGGCATCTTTCATAtt  >  1:803945/1‑67 (MQ=255) cgTACTGTGAACCGAACAACTGAACATCACCCACGCCCGACGTACGGCTGATGGCATCTTTCATAtt  >  1:864833/1‑67 (MQ=255) cgTACTGTGAACCGAACAACTGAACATCACCCACGCCCGACGTACGGCTGATGGCATCTTTCATAtt  >  1:872111/1‑67 (MQ=255) cgTACTGTGAACCGAACAACTGAACATCACCCACGCCCGACGTACGGCTGATGGCATCTTTCATAtt  >  1:90684/1‑67 (MQ=255) cgTACTGTGAACCGAACAACTGAACATCACCCACGCCCGACGTACGGCTGATGGCATCTTTCATAtt  >  1:906947/1‑67 (MQ=255) cgTACTGTGAACCGAACAACTGAACATCACCCACGCCCGACGTACGGCTGATGGCATCTTTCATAtt  >  1:921589/1‑67 (MQ=255) cgTACTGTGAACCGAACAACTGAACATCACCCACGCCCGACGTACGGCTGATGGCATCTTTCATAtt  >  1:1023591/1‑67 (MQ=255) cgTACTGTGAACCGAACAACTGAACATCACCCACGCCCGACGTACGGCTGATGGCATCTTTCATAtt  >  1:2148030/1‑67 (MQ=255) cgTACTGTGAACCGAACAACTGAACATCACCCACGCCCGACGTACGGCTGATGGCATCTTTCATAtt  >  1:1090209/1‑67 (MQ=255) cgTACTGTGAACCGAACAACTGAACATCACCCACGCCCGACGTACGGCTGATGGCATCTTTCATAtt  >  1:11153/1‑67 (MQ=255) cgTACTGTGAACCGAACAACTGAACATCACCCACGCCCGACGTACGGCTGATGGCATCTTTCATAtt  >  1:1120802/1‑67 (MQ=255) cgTACTGTGAACCGAACAACTGAACATCACCCACGCCCGACGTACGGCTGATGGCATCTTTCATAtt  >  1:1132475/1‑67 (MQ=255) cgTACTGTGAACCGAACAACTGAACATCACCCACGCCCGACGTACGGCTGATGGCATCTTTCATAtt  >  1:1183985/1‑67 (MQ=255) cgTACTGTGAACCGAACAACTGAACATCACCCACGCCCGACGTACGGCTGATGGCATCTTTCATAtt  >  1:1213194/1‑67 (MQ=255) cgTACTGTGAACCGAACAACTGAACATCACCCACGCCCGACGTACGGCTGATGGCATCTTTCATAtt  >  1:1322705/1‑67 (MQ=255) cgTACTGTGAACCGAACAACTGAACATCACCCACGCCCGACGTACGGCTGATGGCATCTTTCATAtt  >  1:1457157/1‑67 (MQ=255) cgTACTGTGAACCGAACAACTGAACATCACCCACGCCCGACGTACGGCTGATGGCATCTTTCATAtt  >  1:1476121/1‑67 (MQ=255) cgTACTGTGAACCGAACAACTGAACATCACCCACGCCCGACGTACGGCTGATGGCATCTTTCATAtt  >  1:1598696/1‑67 (MQ=255) cgTACTGTGAACCGAACAACTGAACATCACCCACGCCCGACGTACGGCTGATGGCATCTTTCATAtt  >  1:1629693/1‑67 (MQ=255) cgTACTGTGAACCGAACAACTGAACATCACCCACGCCCGACGTACGGCTGATGGCATCTTTCATAtt  >  1:1648740/1‑67 (MQ=255) cgTACTGTGAACCGAACAACTGAACATCACCCACGCCCGACGTACGGCTGATGGCATCTTTCATAtt  >  1:1655994/1‑67 (MQ=255) cgTACTGTGAACCGAACAACTGAACATCACCCACGCCCGACGTACGGCTGATGGCATCTTTCATAtt  >  1:1673978/1‑67 (MQ=255) cgTACTGTGAACCGAACAACTGAACATCACCCACGCCCGACGTACGGCTGATGGCATCTTTCATAtt  >  1:171354/1‑67 (MQ=255) cgTACTGTGAACCGAACAACTGAACATCACCCACGCCCGACGTACGGCTGATGGCATCTTTCATAtt  >  1:1762821/1‑67 (MQ=255) cgTACTGTGAACCGAACAACTGAACATCACCCACGCCCGACGTACGGCTGATGGCATCTTTCATAtt  >  1:1828352/1‑67 (MQ=255) cgTACTGTGAACCGAACAACTGAACATCACCCACGCCCGACGTACGGCTGATGGCATCTTTCATAtt  >  1:1901188/1‑67 (MQ=255) cgTACTGTGAACCGAACAACTGAACATCACCCACGCCCGACGTACGGCTGATGGCATCTTTCATAtt  >  1:1969621/1‑67 (MQ=255) cgTACTGTGAACCGAACAACTGAACATCACCCACGCCCGACGTACGGCTGATGGCATCTTTCATAtt  >  1:2089952/1‑67 (MQ=255) cgTACTGTGAACCGAACAACTGAACATCACCCACGCCCGACGTACGGCTGATGGCATCTTTCATAtt  >  1:2090923/1‑67 (MQ=255) cgTACTGTGAACCGAACAACTGAACATCACCCACGCCCGACGTACGGCTGATGGCATCTTTCATAtt  >  1:2093368/1‑67 (MQ=255) cgTACTGTGAACCGAACAACTGAACATCACCCACGCCCGACGTACGGCTGATGGCATCTTTCATAtt  >  1:2101856/1‑67 (MQ=255) cgTACTGTGAACCGAACAACTGAACATCACCCACGCCCGACGTACGGCTGATGGCATCTTTCATAtt  >  1:2119576/1‑67 (MQ=255) cgTACTGTGAACCGAACAACTGAACATCACCCACGCCCGACGTACGGCTGATGGCATCTTTCATAtt  >  1:2129175/1‑67 (MQ=255) cgTACTGTGAACCGAACAACTGAACATCACCCACGCCCGACGTACGGCTGATGGCATCTTTCATAtt  >  1:288695/1‑67 (MQ=255) cgTACTGTGAACCGAACAACTGAACATCACCCACGCCCGACGTACGCCTGATGGCATCTTTCa      >  1:536085/1‑63 (MQ=255) cgTACTGTGAACCGAACAACTGAACATCACACACGCCCGACGTAc                        >  1:591594/1‑45 (MQ=255) cgTACTGTGAACCGAACAACTGAACATAACCCACGCCCGACGTACGGCTGATGGCATCTTTCATAtt  >  1:1907273/1‑67 (MQ=255) cgTACTGTGAACCCAACAACTGAACATCGCCCACGCCCGACGTACGGCTGATGGCATCTTTCATAtt  >  1:915312/1‑67 (MQ=255) |                                                                   CGTACTGTGAACCGAACAACTGAACATCACCCACGCCCGACGTACGGCTGATGGCATCTTTCATATT  >  minE/312326‑312392

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑