Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	332648	332655	8	14 [0]	[0] 30	fsr	predicted fosmidomycin efflux system

CACCGCCGCCAGCAAGGGTCCCAGGGAACTGCCAAAGTTGCCGCCGACCTGAAAGATAGATTGCGCC  >  minE/332656‑332722 |                                                                   cACCGCCGCCAGCAAGGGTCCCAGGGAACTGCCAGAGTTGCCGCCGACCTGAAAGATAGATTGCGcc  >  1:905248/1‑67 (MQ=255) cACCGCCGCCAGCAAGGGTCCCAGGGAACTGCCAAAGt                               >  1:180145/1‑38 (MQ=255) cACCGCCGCCAGCAAGGGTCCCAGGGAACTGCCAAAGTTgccgcc                        >  1:1701287/1‑45 (MQ=255) cACCGCCGCCAGCAAGGGTCCCAGGGAACTGCCAAAGTTGCCGCCGACCTGAAAGATAGATTgcgc   >  1:981497/1‑66 (MQ=255) cACCGCCGCCAGCAAGGGTCCCAGGGAACTGCCAAAGTTGCCGCCGACCTGAAAGATAGATTgcgc   >  1:630458/1‑66 (MQ=255) cACCGCCGCCAGCAAGGGTCCCAGGGAACTGCCAAAGTTGCCGCCGACCTGAAAGATAGATTGCGcc  >  1:427774/1‑67 (MQ=255) cACCGCCGCCAGCAAGGGTCCCAGGGAACTGCCAAAGTTGCCGCCGACCTGAAAGATAGATTGCGcc  >  1:891380/1‑67 (MQ=255) cACCGCCGCCAGCAAGGGTCCCAGGGAACTGCCAAAGTTGCCGCCGACCTGAAAGATAGATTGCGcc  >  1:799283/1‑67 (MQ=255) cACCGCCGCCAGCAAGGGTCCCAGGGAACTGCCAAAGTTGCCGCCGACCTGAAAGATAGATTGCGcc  >  1:709291/1‑67 (MQ=255) cACCGCCGCCAGCAAGGGTCCCAGGGAACTGCCAAAGTTGCCGCCGACCTGAAAGATAGATTGCGcc  >  1:698642/1‑67 (MQ=255) cACCGCCGCCAGCAAGGGTCCCAGGGAACTGCCAAAGTTGCCGCCGACCTGAAAGATAGATTGCGcc  >  1:662003/1‑67 (MQ=255) cACCGCCGCCAGCAAGGGTCCCAGGGAACTGCCAAAGTTGCCGCCGACCTGAAAGATAGATTGCGcc  >  1:594281/1‑67 (MQ=255) cACCGCCGCCAGCAAGGGTCCCAGGGAACTGCCAAAGTTGCCGCCGACCTGAAAGATAGATTGCGcc  >  1:587732/1‑67 (MQ=255) cACCGCCGCCAGCAAGGGTCCCAGGGAACTGCCAAAGTTGCCGCCGACCTGAAAGATAGATTGCGcc  >  1:572032/1‑67 (MQ=255) cACCGCCGCCAGCAAGGGTCCCAGGGAACTGCCAAAGTTGCCGCCGACCTGAAAGATAGATTGCGcc  >  1:469944/1‑67 (MQ=255) cACCGCCGCCAGCAAGGGTCCCAGGGAACTGCCAAAGTTGCCGCCGACCTGAAAGATAGATTGCGcc  >  1:428430/1‑67 (MQ=255) cACCGCCGCCAGCAAGGGTCCCAGGGAACTGCCAAAGTTGCCGCCGACCTGAAAGATAGATTGCGcc  >  1:1193107/1‑67 (MQ=255) cACCGCCGCCAGCAAGGGTCCCAGGGAACTGCCAAAGTTGCCGCCGACCTGAAAGATAGATTGCGcc  >  1:364935/1‑67 (MQ=255) cACCGCCGCCAGCAAGGGTCCCAGGGAACTGCCAAAGTTGCCGCCGACCTGAAAGATAGATTGCGcc  >  1:316946/1‑67 (MQ=255) cACCGCCGCCAGCAAGGGTCCCAGGGAACTGCCAAAGTTGCCGCCGACCTGAAAGATAGATTGCGcc  >  1:1951060/1‑67 (MQ=255) cACCGCCGCCAGCAAGGGTCCCAGGGAACTGCCAAAGTTGCCGCCGACCTGAAAGATAGATTGCGcc  >  1:1942948/1‑67 (MQ=255) cACCGCCGCCAGCAAGGGTCCCAGGGAACTGCCAAAGTTGCCGCCGACCTGAAAGATAGATTGCGcc  >  1:1862920/1‑67 (MQ=255) cACCGCCGCCAGCAAGGGTCCCAGGGAACTGCCAAAGTTGCCGCCGACCTGAAAGATAGATTGCGcc  >  1:1809945/1‑67 (MQ=255) cACCGCCGCCAGCAAGGGTCCCAGGGAACTGCCAAAGTTGCCGCCGACCTGAAAGATAGATTGCGcc  >  1:177626/1‑67 (MQ=255) cACCGCCGCCAGCAAGGGTCCCAGGGAACTGCCAAAGTTGCCGCCGACCTGAAAGATAGATTGCGcc  >  1:1653019/1‑67 (MQ=255) cACCGCCGCCAGCAAGGGTCCCAGGGAACTGCCAAAGTTGCCGCCGACCTGAAAGATAGATTGCGcc  >  1:1637969/1‑67 (MQ=255) cACCGCCGCCAGCAAGGGTCCCAGGGAACTGCCAAAGTTGCCGCCGACCTGAAAGATAGATTGCGcc  >  1:159006/1‑67 (MQ=255) cACCGCCGCCAGCAAGGGTCCCAGGGAACTGCCAAAGTTGCCGCCGACCTGAAAGATAGATTGCGcc  >  1:137739/1‑67 (MQ=255) cACCGCCGCCAGCAAGGGTCCCAGGGAACTGCCAAAGTTGCCGCCGACCTGAAAGATAGATTGCGcc  >  1:1370394/1‑67 (MQ=255) cACCGACGCCAGCAAGGGTCCCAGGGACCTGCAAAAGTTGcagccg                       >  1:790187/1‑46 (MQ=255) |                                                                   CACCGCCGCCAGCAAGGGTCCCAGGGAACTGCCAAAGTTGCCGCCGACCTGAAAGATAGATTGCGCC  >  minE/332656‑332722

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑