Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	669563	669567	5	17 [0]	[0] 8	pqiA	paraquat‑inducible membrane protein A

TCGCTGGGGTCATTCTGTTATGGAGCGAAGGCTCTTATCCCGTCGCTGCGGTGATCTTTCTGGCCAG  >  minE/669568‑669634 |                                                                   tcGCTGGGGTCATTCTGTTATGGAGCGAAGGCTCTTATCCCGTCGCTGCGGTGATCTTTCTGGCCAg  >  1:1338262/1‑67 (MQ=255) tcGCTGGGGTCATTCTGTTATGGAGCGAAGGCTCTTATCCCGTCGCTGCGGTGATCTTTCTGGCCAg  >  1:139761/1‑67 (MQ=255) tcGCTGGGGTCATTCTGTTATGGAGCGAAGGCTCTTATCCCGTCGCTGCGGTGATCTTTCTGGCCAg  >  1:1801281/1‑67 (MQ=255) tcGCTGGGGTCATTCTGTTATGGAGCGAAGGCTCTTATCCCGTCGCTGCGGTGATCTTTCTGGCCAg  >  1:2060291/1‑67 (MQ=255) tcGCTGGGGTCATTCTGTTATGGAGCGAAGGCTCTTATCCCGTCGCTGCGGTGATCTTTCTGGCCAg  >  1:2142117/1‑67 (MQ=255) tcGCTGGGGTCATTCTGTTATGGAGCGAAGGCTCTTATCCCGTCGCTGCGGTGATCTTTCTGGCCAg  >  1:781608/1‑67 (MQ=255) tcGCTGGGGTCATTCTGTTATGGAGCGAAGGCTCTTATCCCGTCGCTGCGGTGATCTTTCTGGCCAg  >  1:815336/1‑67 (MQ=255) tcGCTGGGGTCATTCTGTTATGGAGCGAAGGCTCTTATCCCGTCGCTGCGGTGATCTTTCTGGCCAg  >  1:982958/1‑67 (MQ=255) |                                                                   TCGCTGGGGTCATTCTGTTATGGAGCGAAGGCTCTTATCCCGTCGCTGCGGTGATCTTTCTGGCCAG  >  minE/669568‑669634

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑