Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1004265	1004270	6	2 [0]	[0] 58	pntA	pyridine nucleotide transhydrogenase, alpha subunit

CCACGTAATAACCGACAACGCAGGCCAGCGCGAAAACGGTGAAGTGCCCAAGGAATTCTTTCGGCGC  >  minE/1004271‑1004337 |                                                                   ccatGTAATAACCGACAACGCAGGCCAGCGCGAAAACGGTGAAGTGCCCAAGGAATTCTTTCGgcgc  >  1:148995/1‑67 (MQ=255) ccacGTAATAACCGACAACGCAGGCCAGCGCGaaaa                                 >  1:581350/1‑36 (MQ=255) ccacGTAATAACCGACAACGCAGGCCAGCGCGAAAACGGTGa                           >  1:1766593/1‑42 (MQ=255) ccacGTAATAACCGACAACGCAGGCCAGCGCGAAAACGGTGAAGTGCCCAAGGAAtt            >  1:1371573/1‑57 (MQ=255) ccacGTAATAACCGACAACGCAGGCCAGCGCGAAAACGGTGAAGTGCCCAAGGAATTCTTTCGgcgc  >  1:1933016/1‑67 (MQ=255) ccacGTAATAACCGACAACGCAGGCCAGCGCGAAAACGGTGAAGTGCCCAAGGAATTCTTTCGgcgc  >  1:1893964/1‑67 (MQ=255) ccacGTAATAACCGACAACGCAGGCCAGCGCGAAAACGGTGAAGTGCCCAAGGAATTCTTTCGgcgc  >  1:1953504/1‑67 (MQ=255) ccacGTAATAACCGACAACGCAGGCCAGCGCGAAAACGGTGAAGTGCCCAAGGAATTCTTTCGgcgc  >  1:1983393/1‑67 (MQ=255) ccacGTAATAACCGACAACGCAGGCCAGCGCGAAAACGGTGAAGTGCCCAAGGAATTCTTTCGgcgc  >  1:2052125/1‑67 (MQ=255) ccacGTAATAACCGACAACGCAGGCCAGCGCGAAAACGGTGAAGTGCCCAAGGAATTCTTTCGgcgc  >  1:206304/1‑67 (MQ=255) ccacGTAATAACCGACAACGCAGGCCAGCGCGAAAACGGTGAAGTGCCCAAGGAATTCTTTCGgcgc  >  1:2074987/1‑67 (MQ=255) ccacGTAATAACCGACAACGCAGGCCAGCGCGAAAACGGTGAAGTGCCCAAGGAATTCTTTCGgcgc  >  1:2076365/1‑67 (MQ=255) ccacGTAATAACCGACAACGCAGGCCAGCGCGAAAACGGTGAAGTGCCCAAGGAATTCTTTCGgcgc  >  1:2089918/1‑67 (MQ=255) ccacGTAATAACCGACAACGCAGGCCAGCGCGAAAACGGTGAAGTGCCCAAGGAATTCTTTCGgcgc  >  1:2101929/1‑67 (MQ=255) ccacGTAATAACCGACAACGCAGGCCAGCGCGAAAACGGTGAAGTGCCCAAGGAATTCTTTCGgcgc  >  1:2127591/1‑67 (MQ=255) ccacGTAATAACCGACAACGCAGGCCAGCGCGAAAACGGTGAAGTGCCCAAGGAATTCTTTCGgcgc  >  1:226299/1‑67 (MQ=255) ccacGTAATAACCGACAACGCAGGCCAGCGCGAAAACGGTGAAGTGCCCAAGGAATTCTTTCGgcgc  >  1:40275/1‑67 (MQ=255) ccacGTAATAACCGACAACGCAGGCCAGCGCGAAAACGGTGAAGTGCCCAAGGAATTCTTTCGgcgc  >  1:500956/1‑67 (MQ=255) ccacGTAATAACCGACAACGCAGGCCAGCGCGAAAACGGTGAAGTGCCCAAGGAATTCTTTCGgcgc  >  1:539150/1‑67 (MQ=255) ccacGTAATAACCGACAACGCAGGCCAGCGCGAAAACGGTGAAGTGCCCAAGGAATTCTTTCGgcgc  >  1:550497/1‑67 (MQ=255) ccacGTAATAACCGACAACGCAGGCCAGCGCGAAAACGGTGAAGTGCCCAAGGAATTCTTTCGgcgc  >  1:606419/1‑67 (MQ=255) ccacGTAATAACCGACAACGCAGGCCAGCGCGAAAACGGTGAAGTGCCCAAGGAATTCTTTCGgcgc  >  1:618256/1‑67 (MQ=255) ccacGTAATAACCGACAACGCAGGCCAGCGCGAAAACGGTGAAGTGCCCAAGGAATTCTTTCGgcgc  >  1:668305/1‑67 (MQ=255) ccacGTAATAACCGACAACGCAGGCCAGCGCGAAAACGGTGAAGTGCCCAAGGAATTCTTTCGgcgc  >  1:700699/1‑67 (MQ=255) ccacGTAATAACCGACAACGCAGGCCAGCGCGAAAACGGTGAAGTGCCCAAGGAATTCTTTCGgcgc  >  1:720162/1‑67 (MQ=255) ccacGTAATAACCGACAACGCAGGCCAGCGCGAAAACGGTGAAGTGCCCAAGGAATTCTTTCGgcgc  >  1:77498/1‑67 (MQ=255) ccacGTAATAACCGACAACGCAGGCCAGCGCGAAAACGGTGAAGTGCCCAAGGAATTCTTTCGgcgc  >  1:792770/1‑67 (MQ=255) ccacGTAATAACCGACAACGCAGGCCAGCGCGAAAACGGTGAAGTGCCCAAGGAATTCTTTCGgcgc  >  1:798560/1‑67 (MQ=255) ccacGTAATAACCGACAACGCAGGCCAGCGCGAAAACGGTGAAGTGCCCAAGGAATTCTTTCGgcgc  >  1:832641/1‑67 (MQ=255) ccacGTAATAACCGACAACGCAGGCCAGCGCGAAAACGGTGAAGTGCCCAAGGAATTCTTTCGgcgc  >  1:945412/1‑67 (MQ=255) ccacGTAATAACCGACAACGCAGGCCAGCGCGAAAACGGTGAAGTGCCCAAGGAATTCTTTCGgcgc  >  1:1335484/1‑67 (MQ=255) ccacGTAATAACCGACAACGCAGGCCAGCGCGAAAACGGTGAAGTGCCCAAGGAATTCTTTCGgcgc  >  1:1018862/1‑67 (MQ=255) ccacGTAATAACCGACAACGCAGGCCAGCGCGAAAACGGTGAAGTGCCCAAGGAATTCTTTCGgcgc  >  1:1052032/1‑67 (MQ=255) ccacGTAATAACCGACAACGCAGGCCAGCGCGAAAACGGTGAAGTGCCCAAGGAATTCTTTCGgcgc  >  1:1065451/1‑67 (MQ=255) ccacGTAATAACCGACAACGCAGGCCAGCGCGAAAACGGTGAAGTGCCCAAGGAATTCTTTCGgcgc  >  1:1129027/1‑67 (MQ=255) ccacGTAATAACCGACAACGCAGGCCAGCGCGAAAACGGTGAAGTGCCCAAGGAATTCTTTCGgcgc  >  1:1145897/1‑67 (MQ=255) ccacGTAATAACCGACAACGCAGGCCAGCGCGAAAACGGTGAAGTGCCCAAGGAATTCTTTCGgcgc  >  1:1164651/1‑67 (MQ=255) ccacGTAATAACCGACAACGCAGGCCAGCGCGAAAACGGTGAAGTGCCCAAGGAATTCTTTCGgcgc  >  1:1212487/1‑67 (MQ=255) ccacGTAATAACCGACAACGCAGGCCAGCGCGAAAACGGTGAAGTGCCCAAGGAATTCTTTCGgcgc  >  1:1239380/1‑67 (MQ=255) ccacGTAATAACCGACAACGCAGGCCAGCGCGAAAACGGTGAAGTGCCCAAGGAATTCTTTCGgcgc  >  1:1303944/1‑67 (MQ=255) ccacGTAATAACCGACAACGCAGGCCAGCGCGAAAACGGTGAAGTGCCCAAGGAATTCTTTCGgcgc  >  1:1315014/1‑67 (MQ=255) ccacGTAATAACCGACAACGCAGGCCAGCGCGAAAACGGTGAAGTGCCCAAGGAATTCTTTCGgcgc  >  1:1316518/1‑67 (MQ=255) ccacGTAATAACCGACAACGCAGGCCAGCGCGAAAACGGTGAAGTGCCCAAGGAATTCTTTCGgcgc  >  1:1317411/1‑67 (MQ=255) ccacGTAATAACCGACAACGCAGGCCAGCGCGAAAACGGTGAAGTGCCCAAGGAATTCTTTCGgcgc  >  1:1005295/1‑67 (MQ=255) ccacGTAATAACCGACAACGCAGGCCAGCGCGAAAACGGTGAAGTGCCCAAGGAATTCTTTCGgcgc  >  1:1445307/1‑67 (MQ=255) ccacGTAATAACCGACAACGCAGGCCAGCGCGAAAACGGTGAAGTGCCCAAGGAATTCTTTCGgcgc  >  1:1506799/1‑67 (MQ=255) ccacGTAATAACCGACAACGCAGGCCAGCGCGAAAACGGTGAAGTGCCCAAGGAATTCTTTCGgcgc  >  1:1520242/1‑67 (MQ=255) ccacGTAATAACCGACAACGCAGGCCAGCGCGAAAACGGTGAAGTGCCCAAGGAATTCTTTCGgcgc  >  1:1539970/1‑67 (MQ=255) ccacGTAATAACCGACAACGCAGGCCAGCGCGAAAACGGTGAAGTGCCCAAGGAATTCTTTCGgcgc  >  1:1564887/1‑67 (MQ=255) ccacGTAATAACCGACAACGCAGGCCAGCGCGAAAACGGTGAAGTGCCCAAGGAATTCTTTCGgcgc  >  1:1692430/1‑67 (MQ=255) ccacGTAATAACCGACAACGCAGGCCAGCGCGAAAACGGTGAAGTGCCCAAGGAATTCTTTCGgcgc  >  1:1729202/1‑67 (MQ=255) ccacGTAATAACCGACAACGCAGGCCAGCGCGAAAACGGTGAAGTGCCCAAGGAATTCTTTCGgcgc  >  1:182236/1‑67 (MQ=255) ccacGTAATAACCGACAACGCAGGCCAGCGCGAAAACGGTGAAGTGCCCAAGGAATTCTTTCGgcgc  >  1:1825869/1‑67 (MQ=255) ccacGTAATAACCGACAACGCAGGCCAGCGCGAAAACGGTGAAGTGCCCAAGGAATTCTTTCGgcgc  >  1:1873451/1‑67 (MQ=255) ccacGTAATAACCGACAACGCAGGCCAGCGCGAAAACGGTGAAGTGCCCAAGGAATTCTTTCGgcgc  >  1:1875665/1‑67 (MQ=255) ccacGTAATAACCGACAACGCAGGCCAGCGCGAAAACGGTGAAGTGCCCAAGGAATTCTTTCGgcg   >  1:1355986/1‑66 (MQ=255) ccacGTAATAACCGACAACGCAGGCCAGCGCGAAAACGGTGAAGTGCCCAAGGAATTCTTTCGgcac  >  1:334062/1‑65 (MQ=255) ccacGTAATAACCGACAACGAAGGCCAGCGCGAAAACGGTGAAGTGCCCAAGGAATTCTTTCGgcgc  >  1:744897/1‑67 (MQ=255) |                                                                   CCACGTAATAACCGACAACGCAGGCCAGCGCGAAAACGGTGAAGTGCCCAAGGAATTCTTTCGGCGC  >  minE/1004271‑1004337

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑