Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1226585	1226588	4	13 [0]	[0] 28	pphA	serine/threonine‑specific protein phosphatase 1

ATTCATCAACCACAAAGACATCTGCTGGGATGCCAGCGCATCCATCGCCATCTGTTCATGATTGCCT  >  minE/1226589‑1226655 |                                                                   aTTCATCAACCACAAAGACATCTGCTGGGATGCCAGCGCATCCATCGCCATCTGTTCATGATTGCct  <  1:1767973/67‑1 (MQ=255) aTTCATCAACCACAAAGACATCTGCTGGGATGCCAGCGCATCCATCGCCATCTGTTCATGATTGCct  <  1:977416/67‑1 (MQ=255) aTTCATCAACCACAAAGACATCTGCTGGGATGCCAGCGCATCCATCGCCATCTGTTCATGATTGCct  <  1:971137/67‑1 (MQ=255) aTTCATCAACCACAAAGACATCTGCTGGGATGCCAGCGCATCCATCGCCATCTGTTCATGATTGCct  <  1:850611/67‑1 (MQ=255) aTTCATCAACCACAAAGACATCTGCTGGGATGCCAGCGCATCCATCGCCATCTGTTCATGATTGCct  <  1:805334/67‑1 (MQ=255) aTTCATCAACCACAAAGACATCTGCTGGGATGCCAGCGCATCCATCGCCATCTGTTCATGATTGCct  <  1:80466/67‑1 (MQ=255) aTTCATCAACCACAAAGACATCTGCTGGGATGCCAGCGCATCCATCGCCATCTGTTCATGATTGCct  <  1:675652/67‑1 (MQ=255) aTTCATCAACCACAAAGACATCTGCTGGGATGCCAGCGCATCCATCGCCATCTGTTCATGATTGCct  <  1:536713/67‑1 (MQ=255) aTTCATCAACCACAAAGACATCTGCTGGGATGCCAGCGCATCCATCGCCATCTGTTCATGATTGCct  <  1:484533/67‑1 (MQ=255) aTTCATCAACCACAAAGACATCTGCTGGGATGCCAGCGCATCCATCGCCATCTGTTCATGATTGCct  <  1:225679/67‑1 (MQ=255) aTTCATCAACCACAAAGACATCTGCTGGGATGCCAGCGCATCCATCGCCATCTGTTCATGATTGCct  <  1:2098974/67‑1 (MQ=255) aTTCATCAACCACAAAGACATCTGCTGGGATGCCAGCGCATCCATCGCCATCTGTTCATGATTGCct  <  1:1899221/67‑1 (MQ=255) aTTCATCAACCACAAAGACATCTGCTGGGATGCCAGCGCATCCATCGCCATCTGTTCATGATTGCct  <  1:1825722/67‑1 (MQ=255) aTTCATCAACCACAAAGACATCTGCTGGGATGCCAGCGCATCCATCGCCATCTGTTCATGATTGCct  <  1:1028024/67‑1 (MQ=255) aTTCATCAACCACAAAGACATCTGCTGGGATGCCAGCGCATCCATCGCCATCTGTTCATGATTGCct  <  1:1747255/67‑1 (MQ=255) aTTCATCAACCACAAAGACATCTGCTGGGATGCCAGCGCATCCATCGCCATCTGTTCATGATTGCct  <  1:1654060/67‑1 (MQ=255) aTTCATCAACCACAAAGACATCTGCTGGGATGCCAGCGCATCCATCGCCATCTGTTCATGATTGCct  <  1:1651618/67‑1 (MQ=255) aTTCATCAACCACAAAGACATCTGCTGGGATGCCAGCGCATCCATCGCCATCTGTTCATGATTGCct  <  1:1515374/67‑1 (MQ=255) aTTCATCAACCACAAAGACATCTGCTGGGATGCCAGCGCATCCATCGCCATCTGTTCATGATTGCct  <  1:1493647/67‑1 (MQ=255) aTTCATCAACCACAAAGACATCTGCTGGGATGCCAGCGCATCCATCGCCATCTGTTCATGATTGCct  <  1:1397980/67‑1 (MQ=255) aTTCATCAACCACAAAGACATCTGCTGGGATGCCAGCGCATCCATCGCCATCTGTTCATGATTGCct  <  1:1389104/67‑1 (MQ=255) aTTCATCAACCACAAAGACATCTGCTGGGATGCCAGCGCATCCATCGCCATCTGTTCATGATTGCct  <  1:1329058/67‑1 (MQ=255) aTTCATCAACCACAAAGACATCTGCTGGGATGCCAGCGCATCCATCGCCATCTGTTCATGATTGCct  <  1:1160609/67‑1 (MQ=255) aTTCATCAACCACAAAGACATCTGCTGGGATGCCAGCGCATCCATCGCCATCTGTTCATGATTGCct  <  1:1146502/67‑1 (MQ=255) aTTCATCAACCACAAAGACATCTGCTGGGATGCCAGCGCATCCATCGCCATCTGTTCATGATTGCct  <  1:1127099/67‑1 (MQ=255) aTTCATCAACCACAAAGACATCTGCTGGGATGCCAGCGCATCCATCGCCATCTGTTCATGATTGCct  <  1:1078073/67‑1 (MQ=255) aTTCATCAACCACAAAGACATCTGCTGGGATGCCAGCGCATCCATCGCCATCTGTTCATGATTGCct  <  1:1073345/67‑1 (MQ=255) aTTCATCAACCACAAAGACATCTGCTGGGATGCCAGCGCATCCATCGCCATCTGTTCATGATCGCct  <  1:892797/67‑1 (MQ=255) |                                                                   ATTCATCAACCACAAAGACATCTGCTGGGATGCCAGCGCATCCATCGCCATCTGTTCATGATTGCCT  >  minE/1226589‑1226655

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑