Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1450158	1450171	14	2 [0]	[0] 31	atoC	fused response regulator of ato opeon, in two‑component system with AtoS

TACTACAAGCCAAATTACTACGCATTCTACAGGAACGGGAATTTGAACGGATTGGCGGCCATCAGAC  >  minE/1450172‑1450238 |                                                                   tactacAAGCCAAATTACTACGCATTCTACAGGAACGGGaa                            >  1:14990/1‑41 (MQ=255) tactacAAGCCAAATTACTACGCATTCTACAGGAACGGGAATTTGAACgg                   >  1:252564/1‑50 (MQ=255) tactacAAGCCAAATTACTACGCATTCTACAGGAACGGGAATTTGAACGGATTGGCGGcc         >  1:2132103/1‑60 (MQ=255) tactacAAGCCAAATTACTACGCATTCTACAGGAACGGGAATTTGAACGGATTGGCGGCCAt       >  1:706337/1‑62 (MQ=255) tactacAAGCCAAATTACTACGCATTCTACAGGAACGGGAATTTGAACGGATTGGCGGCCATCAGa   >  1:1051604/1‑66 (MQ=255) tactacAAGCCAAATTACTACGCATTCTACAGGAACGGGAATTTGAACGGATTGGCGGCCATCAGa   >  1:55056/1‑66 (MQ=255) tactacAAGCCAAATTACTACGCATTCTACAGGAACGGGAATTTGAACGGATTGGCGGCCATCAGAc  >  1:1957459/1‑67 (MQ=255) tactacAAGCCAAATTACTACGCATTCTACAGGAACGGGAATTTGAACGGATTGGCGGCCATCAGAc  >  1:1837105/1‑67 (MQ=255) tactacAAGCCAAATTACTACGCATTCTACAGGAACGGGAATTTGAACGGATTGGCGGCCATCAGAc  >  1:2012340/1‑67 (MQ=255) tactacAAGCCAAATTACTACGCATTCTACAGGAACGGGAATTTGAACGGATTGGCGGCCATCAGAc  >  1:2032319/1‑67 (MQ=255) tactacAAGCCAAATTACTACGCATTCTACAGGAACGGGAATTTGAACGGATTGGCGGCCATCAGAc  >  1:2088278/1‑67 (MQ=255) tactacAAGCCAAATTACTACGCATTCTACAGGAACGGGAATTTGAACGGATTGGCGGCCATCAGAc  >  1:681879/1‑67 (MQ=255) tactacAAGCCAAATTACTACGCATTCTACAGGAACGGGAATTTGAACGGATTGGCGGCCATCAGAc  >  1:739802/1‑67 (MQ=255) tactacAAGCCAAATTACTACGCATTCTACAGGAACGGGAATTTGAACGGATTGGCGGCCATCAGAc  >  1:835458/1‑67 (MQ=255) tactacAAGCCAAATTACTACGCATTCTACAGGAACGGGAATTTGAACGGATTGGCGGCCATCAGAc  >  1:843097/1‑67 (MQ=255) tactacAAGCCAAATTACTACGCATTCTACAGGAACGGGAATTTGAACGGATTGGCGGCCATCAGAc  >  1:903476/1‑67 (MQ=255) tactacAAGCCAAATTACTACGCATTCTACAGGAACGGGAATTTGAACGGATTGGCGGCCATCAGAc  >  1:970952/1‑67 (MQ=255) tactacAAGCCAAATTACTACGCATTCTACAGGAACGGGAATTTGAACGGATTGGCGGCCATCAGAc  >  1:1936167/1‑67 (MQ=255) tactacAAGCCAAATTACTACGCATTCTACAGGAACGGGAATTTGAACGGATTGGCGGCCATCAGAc  >  1:1830193/1‑67 (MQ=255) tactacAAGCCAAATTACTACGCATTCTACAGGAACGGGAATTTGAACGGATTGGCGGCCATCAGAc  >  1:1793201/1‑67 (MQ=255) tactacAAGCCAAATTACTACGCATTCTACAGGAACGGGAATTTGAACGGATTGGCGGCCATCAGAc  >  1:179022/1‑67 (MQ=255) tactacAAGCCAAATTACTACGCATTCTACAGGAACGGGAATTTGAACGGATTGGCGGCCATCAGAc  >  1:1667623/1‑67 (MQ=255) tactacAAGCCAAATTACTACGCATTCTACAGGAACGGGAATTTGAACGGATTGGCGGCCATCAGAc  >  1:1592314/1‑67 (MQ=255) tactacAAGCCAAATTACTACGCATTCTACAGGAACGGGAATTTGAACGGATTGGCGGCCATCAGAc  >  1:1494859/1‑67 (MQ=255) tactacAAGCCAAATTACTACGCATTCTACAGGAACGGGAATTTGAACGGATTGGCGGCCATCAGAc  >  1:1412823/1‑67 (MQ=255) tactacAAGCCAAATTACTACGCATTCTACAGGAACGGGAATTTGAACGGATTGGCGGCCATCAGAc  >  1:1412613/1‑67 (MQ=255) tactacAAGCCAAATTACTACGCATTCTACAGGAACGGGAATTTGAACGGATTGGCGGCCATCAGAc  >  1:1366380/1‑67 (MQ=255) tactacAAGCCAAATTACTACGCATTCTACAGGAACGGGAATTTGAACGGATTGGCGGCCATCAGAc  >  1:1324925/1‑67 (MQ=255) tactacAAGCCAAATTACTACGCATTCTACAGGAACGGGAATTTGAACGGATTGGCGGCCATCAGAc  >  1:1179074/1‑67 (MQ=255) tactacAAGCCAAATTACTACGCATTCTACAGGAACGGGAATTTGAACGGATTGGCGGCCATCAGAc  >  1:1178896/1‑67 (MQ=255) tactacAAGCCAAATTACTACGCATTCTACAGGAACGGGAATTTGAACGGATTGGCGGCCATCAGAc  >  1:1168105/1‑67 (MQ=255) |                                                                   TACTACAAGCCAAATTACTACGCATTCTACAGGAACGGGAATTTGAACGGATTGGCGGCCATCAGAC  >  minE/1450172‑1450238

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑