Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1536918	1536998	81	29 [0]	[0] 40	yfcS	predicted periplasmic pilus chaperone

GAGAACCCTGCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCAC  >  minE/1536999‑1537054 |                                                        gagaACCCTGCAGCTGTATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCAc  <  1:696708/56‑1 (MQ=255) gagaACCCTGCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCAc  <  1:600692/56‑1 (MQ=255) gagaACCCTGCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCAc  <  1:2132752/56‑1 (MQ=255) gagaACCCTGCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCAc  <  1:247253/56‑1 (MQ=255) gagaACCCTGCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCAc  <  1:325538/56‑1 (MQ=255) gagaACCCTGCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCAc  <  1:471256/56‑1 (MQ=255) gagaACCCTGCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCAc  <  1:484593/56‑1 (MQ=255) gagaACCCTGCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCAc  <  1:571870/56‑1 (MQ=255) gagaACCCTGCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCAc  <  1:57898/56‑1 (MQ=255) gagaACCCTGCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCAc  <  1:589558/56‑1 (MQ=255) gagaACCCTGCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCAc  <  1:600491/56‑1 (MQ=255) gagaACCCTGCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCAc  <  1:2131104/56‑1 (MQ=255) gagaACCCTGCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCAc  <  1:694962/56‑1 (MQ=255) gagaACCCTGCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCAc  <  1:741207/56‑1 (MQ=255) gagaACCCTGCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCAc  <  1:817873/56‑1 (MQ=255) gagaACCCTGCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCAc  <  1:869539/56‑1 (MQ=255) gagaACCCTGCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCAc  <  1:875412/56‑1 (MQ=255) gagaACCCTGCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCAc  <  1:90221/56‑1 (MQ=255) gagaACCCTGCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCAc  <  1:953929/56‑1 (MQ=255) gagaACCCTGCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCAc  <  1:963204/56‑1 (MQ=255) gagaACCCTGCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCAc  <  1:1384247/56‑1 (MQ=255) gagaACCCTGCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCAc  <  1:1018293/56‑1 (MQ=255) gagaACCCTGCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCAc  <  1:1029028/56‑1 (MQ=255) gagaACCCTGCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCAc  <  1:1073680/56‑1 (MQ=255) gagaACCCTGCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCAc  <  1:1075604/56‑1 (MQ=255) gagaACCCTGCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCAc  <  1:1096526/56‑1 (MQ=255) gagaACCCTGCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCAc  <  1:1220205/56‑1 (MQ=255) gagaACCCTGCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCAc  <  1:1232085/56‑1 (MQ=255) gagaACCCTGCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCAc  <  1:1324378/56‑1 (MQ=255) gagaACCCTGCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCAc  <  1:1340935/56‑1 (MQ=255) gagaACCCTGCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCAc  <  1:1011098/56‑1 (MQ=255) gagaACCCTGCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCAc  <  1:1571031/56‑1 (MQ=255) gagaACCCTGCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCAc  <  1:1644520/56‑1 (MQ=255) gagaACCCTGCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCAc  <  1:1648558/56‑1 (MQ=255) gagaACCCTGCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCAc  <  1:1690737/56‑1 (MQ=255) gagaACCCTGCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCAc  <  1:171712/56‑1 (MQ=255) gagaACCCTGCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCAc  <  1:1875659/56‑1 (MQ=255) gagaACCCTGCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCAc  <  1:2030854/56‑1 (MQ=255) gagaACCCTGCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCAc  <  1:2035998/56‑1 (MQ=255) gagaACCCTGCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCAc  <  1:2107194/56‑1 (MQ=255) |                                                        GAGAACCCTGCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCAC  >  minE/1536999‑1537054

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑