Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2243534	2243565	32	15 [0]	[0] 64	nfi	endonuclease V

ATTTGTTGAGCGCGTAATGACGCGAGATCCATAATCACTCCTTAGCGGTGATACTGTTCAGACAGTC  >  minE/2243566‑2243632 |                                                                   aTTTGTTGAGCGCGTAATGCCGCGAGATCCATAATCACTCCTTAGCGGTGATACTGTTCAGACAGTc  >  1:418357/1‑67 (MQ=255) aTTTGTTGAGCGCGTAATGCCGCGAGATCCATAATCACTCCTTAGCGGAGATACTGTTCAGACAGTc  >  1:922624/1‑67 (MQ=255) aTTTGTTGAGCGCGTAATGACGCGAGATCCATAATCACTCCTTAGCGGTGAt                 >  1:247188/1‑52 (MQ=255) aTTTGTTGAGCGCGTAATGACGCGAGATCCATAATCACTCCTTAGCGGTGATACTGTTCAGACAGt   >  1:1936996/1‑66 (MQ=255) aTTTGTTGAGCGCGTAATGACGCGAGATCCATAATCACTCCTTAGCGGTGATACTGTTCAGACAGTc  >  1:48724/1‑67 (MQ=255) aTTTGTTGAGCGCGTAATGACGCGAGATCCATAATCACTCCTTAGCGGTGATACTGTTCAGACAGTc  >  1:554371/1‑67 (MQ=255) aTTTGTTGAGCGCGTAATGACGCGAGATCCATAATCACTCCTTAGCGGTGATACTGTTCAGACAGTc  >  1:483500/1‑67 (MQ=255) aTTTGTTGAGCGCGTAATGACGCGAGATCCATAATCACTCCTTAGCGGTGATACTGTTCAGACAGTc  >  1:465018/1‑67 (MQ=255) aTTTGTTGAGCGCGTAATGACGCGAGATCCATAATCACTCCTTAGCGGTGATACTGTTCAGACAGTc  >  1:408767/1‑67 (MQ=255) aTTTGTTGAGCGCGTAATGACGCGAGATCCATAATCACTCCTTAGCGGTGATACTGTTCAGACAGTc  >  1:390263/1‑67 (MQ=255) aTTTGTTGAGCGCGTAATGACGCGAGATCCATAATCACTCCTTAGCGGTGATACTGTTCAGACAGTc  >  1:357582/1‑67 (MQ=255) aTTTGTTGAGCGCGTAATGACGCGAGATCCATAATCACTCCTTAGCGGTGATACTGTTCAGACAGTc  >  1:355187/1‑67 (MQ=255) aTTTGTTGAGCGCGTAATGACGCGAGATCCATAATCACTCCTTAGCGGTGATACTGTTCAGACAGTc  >  1:304505/1‑67 (MQ=255) aTTTGTTGAGCGCGTAATGACGCGAGATCCATAATCACTCCTTAGCGGTGATACTGTTCAGACAGTc  >  1:299138/1‑67 (MQ=255) aTTTGTTGAGCGCGTAATGACGCGAGATCCATAATCACTCCTTAGCGGTGATACTGTTCAGACAGTc  >  1:266464/1‑67 (MQ=255) aTTTGTTGAGCGCGTAATGACGCGAGATCCATAATCACTCCTTAGCGGTGATACTGTTCAGACAGTc  >  1:241114/1‑67 (MQ=255) aTTTGTTGAGCGCGTAATGACGCGAGATCCATAATCACTCCTTAGCGGTGATACTGTTCAGACAGTc  >  1:219141/1‑67 (MQ=255) aTTTGTTGAGCGCGTAATGACGCGAGATCCATAATCACTCCTTAGCGGTGATACTGTTCAGACAGTc  >  1:534969/1‑67 (MQ=255) aTTTGTTGAGCGCGTAATGACGCGAGATCCATAATCACTCCTTAGCGGTGATACTGTTCAGACAGTc  >  1:2120505/1‑67 (MQ=255) aTTTGTTGAGCGCGTAATGACGCGAGATCCATAATCACTCCTTAGCGGTGATACTGTTCAGACAGTc  >  1:564733/1‑67 (MQ=255) aTTTGTTGAGCGCGTAATGACGCGAGATCCATAATCACTCCTTAGCGGTGATACTGTTCAGACAGTc  >  1:611902/1‑67 (MQ=255) aTTTGTTGAGCGCGTAATGACGCGAGATCCATAATCACTCCTTAGCGGTGATACTGTTCAGACAGTc  >  1:627072/1‑67 (MQ=255) aTTTGTTGAGCGCGTAATGACGCGAGATCCATAATCACTCCTTAGCGGTGATACTGTTCAGACAGTc  >  1:645591/1‑67 (MQ=255) aTTTGTTGAGCGCGTAATGACGCGAGATCCATAATCACTCCTTAGCGGTGATACTGTTCAGACAGTc  >  1:651058/1‑67 (MQ=255) aTTTGTTGAGCGCGTAATGACGCGAGATCCATAATCACTCCTTAGCGGTGATACTGTTCAGACAGTc  >  1:775547/1‑67 (MQ=255) aTTTGTTGAGCGCGTAATGACGCGAGATCCATAATCACTCCTTAGCGGTGATACTGTTCAGACAGTc  >  1:778812/1‑67 (MQ=255) aTTTGTTGAGCGCGTAATGACGCGAGATCCATAATCACTCCTTAGCGGTGATACTGTTCAGACAGTc  >  1:88584/1‑67 (MQ=255) aTTTGTTGAGCGCGTAATGACGCGAGATCCATAATCACTCCTTAGCGGTGATACTGTTCAGACAGTc  >  1:909127/1‑67 (MQ=255) aTTTGTTGAGCGCGTAATGACGCGAGATCCATAATCACTCCTTAGCGGTGATACTGTTCAGACAGTc  >  1:91142/1‑67 (MQ=255) aTTTGTTGAGCGCGTAATGACGCGAGATCCATAATCACTCCTTAGCGGTGATACTGTTCAGACAGTc  >  1:914909/1‑67 (MQ=255) aTTTGTTGAGCGCGTAATGACGCGAGATCCATAATCACTCCTTAGCGGTGATACTGTTCAGACAGTc  >  1:915595/1‑67 (MQ=255) aTTTGTTGAGCGCGTAATGACGCGAGATCCATAATCACTCCTTAGCGGTGATACTGTTCAGACAGTc  >  1:916295/1‑67 (MQ=255) aTTTGTTGAGCGCGTAATGACGCGAGATCCATAATCACTCCTTAGCGGTGATACTGTTCAGACAGTc  >  1:957078/1‑67 (MQ=255) aTTTGTTGAGCGCGTAATGACGCGAGATCCATAATCACTCCTTAGCGGTGATACTGTTCAGACAGTc  >  1:168884/1‑67 (MQ=255) aTTTGTTGAGCGCGTAATGACGCGAGATCCATAATCACTCCTTAGCGGTGATACTGTTCAGACAGTc  >  1:1079303/1‑67 (MQ=255) aTTTGTTGAGCGCGTAATGACGCGAGATCCATAATCACTCCTTAGCGGTGATACTGTTCAGACAGTc  >  1:1179477/1‑67 (MQ=255) aTTTGTTGAGCGCGTAATGACGCGAGATCCATAATCACTCCTTAGCGGTGATACTGTTCAGACAGTc  >  1:1209220/1‑67 (MQ=255) aTTTGTTGAGCGCGTAATGACGCGAGATCCATAATCACTCCTTAGCGGTGATACTGTTCAGACAGTc  >  1:1244843/1‑67 (MQ=255) aTTTGTTGAGCGCGTAATGACGCGAGATCCATAATCACTCCTTAGCGGTGATACTGTTCAGACAGTc  >  1:1277687/1‑67 (MQ=255) aTTTGTTGAGCGCGTAATGACGCGAGATCCATAATCACTCCTTAGCGGTGATACTGTTCAGACAGTc  >  1:1301479/1‑67 (MQ=255) aTTTGTTGAGCGCGTAATGACGCGAGATCCATAATCACTCCTTAGCGGTGATACTGTTCAGACAGTc  >  1:1394691/1‑67 (MQ=255) aTTTGTTGAGCGCGTAATGACGCGAGATCCATAATCACTCCTTAGCGGTGATACTGTTCAGACAGTc  >  1:1424284/1‑67 (MQ=255) aTTTGTTGAGCGCGTAATGACGCGAGATCCATAATCACTCCTTAGCGGTGATACTGTTCAGACAGTc  >  1:1471258/1‑67 (MQ=255) aTTTGTTGAGCGCGTAATGACGCGAGATCCATAATCACTCCTTAGCGGTGATACTGTTCAGACAGTc  >  1:1479585/1‑67 (MQ=255) aTTTGTTGAGCGCGTAATGACGCGAGATCCATAATCACTCCTTAGCGGTGATACTGTTCAGACAGTc  >  1:1488706/1‑67 (MQ=255) aTTTGTTGAGCGCGTAATGACGCGAGATCCATAATCACTCCTTAGCGGTGATACTGTTCAGACAGTc  >  1:1579293/1‑67 (MQ=255) aTTTGTTGAGCGCGTAATGACGCGAGATCCATAATCACTCCTTAGCGGTGATACTGTTCAGACAGTc  >  1:1584409/1‑67 (MQ=255) aTTTGTTGAGCGCGTAATGACGCGAGATCCATAATCACTCCTTAGCGGTGATACTGTTCAGACAGTc  >  1:16680/1‑67 (MQ=255) aTTTGTTGAGCGCGTAATGACGCGAGATCCATAATCACTCCTTAGCGGTGATACTGTTCAGACAGTc  >  1:1685174/1‑67 (MQ=255) aTTTGTTGAGCGCGTAATGACGCGAGATCCATAATCACTCCTTAGCGGTGATACTGTTCAGACAGTc  >  1:1044770/1‑67 (MQ=255) aTTTGTTGAGCGCGTAATGACGCGAGATCCATAATCACTCCTTAGCGGTGATACTGTTCAGACAGTc  >  1:1739647/1‑67 (MQ=255) aTTTGTTGAGCGCGTAATGACGCGAGATCCATAATCACTCCTTAGCGGTGATACTGTTCAGACAGTc  >  1:1767378/1‑67 (MQ=255) aTTTGTTGAGCGCGTAATGACGCGAGATCCATAATCACTCCTTAGCGGTGATACTGTTCAGACAGTc  >  1:1788548/1‑67 (MQ=255) aTTTGTTGAGCGCGTAATGACGCGAGATCCATAATCACTCCTTAGCGGTGATACTGTTCAGACAGTc  >  1:1797824/1‑67 (MQ=255) aTTTGTTGAGCGCGTAATGACGCGAGATCCATAATCACTCCTTAGCGGTGATACTGTTCAGACAGTc  >  1:1806481/1‑67 (MQ=255) aTTTGTTGAGCGCGTAATGACGCGAGATCCATAATCACTCCTTAGCGGTGATACTGTTCAGACAGTc  >  1:1871380/1‑67 (MQ=255) aTTTGTTGAGCGCGTAATGACGCGAGATCCATAATCACTCCTTAGCGGTGATACTGTTCAGACAGTc  >  1:1929781/1‑67 (MQ=255) aTTTGTTGAGCGCGTAATGACGCGAGATCCATAATCACTCCTTAGCGGTGATACTGTTCAGACAGTc  >  1:1935612/1‑67 (MQ=255) aTTTGTTGAGCGCGTAATGACGCGAGATCCATAATCACTCCTTAGCGGTGATACTGTTCAGACAGTc  >  1:1936598/1‑67 (MQ=255) aTTTGTTGAGCGCGTAATGACGCGAGATCCATAATCACTCCTTAGCGGTGATACTGTTCAGACAGTc  >  1:1976530/1‑67 (MQ=255) aTTTGTTGAGCGCGTAATGACGCGAGATCCATAATCACTCCTTAGCGGTGATACTGTTCAGACAGTc  >  1:1985937/1‑67 (MQ=255) aTTTGTTGAGCGCGTAATGACGCGAGATCCATAATCACTCCTTAGCGGTGATACTGTTCAGACAGTc  >  1:2026719/1‑67 (MQ=255) aTTTGTTGAGCGCGTAATGACGCGAGATCCATAATCACTCCTTAGCGGTGATACTGTTCAGACAGTc  >  1:2031291/1‑67 (MQ=255) aTTTGTTGAGCGCGTAATGACGCGAGATCCATAATCACTCCTTAGCGGTGATACTGTTCAGACAGTc  >  1:2067035/1‑67 (MQ=255) |                                                                   ATTTGTTGAGCGCGTAATGACGCGAGATCCATAATCACTCCTTAGCGGTGATACTGTTCAGACAGTC  >  minE/2243566‑2243632

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑