Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2256646	2256650	5	19 [0]	[0] 58	rpoC	RNA polymerase, beta prime subunit

ATCGAGCAGCAGACCGATACGGGACGGCAGCGATTTCAGGAACCAGATGTGCGCAGTCGGGGAAGCC  >  minE/2256651‑2256717 |                                                                   atCGAGCAGCAGACCGATACGGGACGGGAGCGATTTCAGGAACCAGATGTGCGCAGTCGGGGAAGcc  >  1:944977/1‑67 (MQ=255) atCGAGCAGCAGACCGATACGGGACGGCAGCGATTTCAgg                             >  1:1150857/1‑40 (MQ=255) atCGAGCAGCAGACCGATACGGGACGGCAGCGATTTCAGGATCCAGATGTGCGCAGTCGGGGAAGcc  >  1:1601599/1‑67 (MQ=255) atCGAGCAGCAGACCGATACGGGACGGCAGCGATTTCAGGAACCAGATGTGGGCAGTCGGGGAAGcc  >  1:125655/1‑67 (MQ=255) atCGAGCAGCAGACCGATACGGGACGGCAGCGATTTCAGGAACCAGATGTGCGCAGTCGGGGAAGcc  >  1:2137454/1‑67 (MQ=255) atCGAGCAGCAGACCGATACGGGACGGCAGCGATTTCAGGAACCAGATGTGCGCAGTCGGGGAAGcc  >  1:458334/1‑67 (MQ=255) atCGAGCAGCAGACCGATACGGGACGGCAGCGATTTCAGGAACCAGATGTGCGCAGTCGGGGAAGcc  >  1:369467/1‑67 (MQ=255) atCGAGCAGCAGACCGATACGGGACGGCAGCGATTTCAGGAACCAGATGTGCGCAGTCGGGGAAGcc  >  1:366060/1‑67 (MQ=255) atCGAGCAGCAGACCGATACGGGACGGCAGCGATTTCAGGAACCAGATGTGCGCAGTCGGGGAAGcc  >  1:2897/1‑67 (MQ=255) atCGAGCAGCAGACCGATACGGGACGGCAGCGATTTCAGGAACCAGATGTGCGCAGTCGGGGAAGcc  >  1:256713/1‑67 (MQ=255) atCGAGCAGCAGACCGATACGGGACGGCAGCGATTTCAGGAACCAGATGTGCGCAGTCGGGGAAGcc  >  1:2146127/1‑67 (MQ=255) atCGAGCAGCAGACCGATACGGGACGGCAGCGATTTCAGGAACCAGATGTGCGCAGTCGGGGAAGcc  >  1:552726/1‑67 (MQ=255) atCGAGCAGCAGACCGATACGGGACGGCAGCGATTTCAGGAACCAGATGTGCGCAGTCGGGGAAGcc  >  1:2083446/1‑67 (MQ=255) atCGAGCAGCAGACCGATACGGGACGGCAGCGATTTCAGGAACCAGATGTGCGCAGTCGGGGAAGcc  >  1:2067081/1‑67 (MQ=255) atCGAGCAGCAGACCGATACGGGACGGCAGCGATTTCAGGAACCAGATGTGCGCAGTCGGGGAAGcc  >  1:2046743/1‑67 (MQ=255) atCGAGCAGCAGACCGATACGGGACGGCAGCGATTTCAGGAACCAGATGTGCGCAGTCGGGGAAGcc  >  1:2026696/1‑67 (MQ=255) atCGAGCAGCAGACCGATACGGGACGGCAGCGATTTCAGGAACCAGATGTGCGCAGTCGGGGAAGcc  >  1:2013423/1‑67 (MQ=255) atCGAGCAGCAGACCGATACGGGACGGCAGCGATTTCAGGAACCAGATGTGCGCAGTCGGGGAAGcc  >  1:548695/1‑67 (MQ=255) atCGAGCAGCAGACCGATACGGGACGGCAGCGATTTCAGGAACCAGATGTGCGCAGTCGGGGAAGcc  >  1:1996155/1‑67 (MQ=255) atCGAGCAGCAGACCGATACGGGACGGCAGCGATTTCAGGAACCAGATGTGCGCAGTCGGGGAAGcc  >  1:631696/1‑67 (MQ=255) atCGAGCAGCAGACCGATACGGGACGGCAGCGATTTCAGGAACCAGATGTGCGCAGTCGGGGAAGcc  >  1:659651/1‑67 (MQ=255) atCGAGCAGCAGACCGATACGGGACGGCAGCGATTTCAGGAACCAGATGTGCGCAGTCGGGGAAGcc  >  1:664292/1‑67 (MQ=255) atCGAGCAGCAGACCGATACGGGACGGCAGCGATTTCAGGAACCAGATGTGCGCAGTCGGGGAAGcc  >  1:782039/1‑67 (MQ=255) atCGAGCAGCAGACCGATACGGGACGGCAGCGATTTCAGGAACCAGATGTGCGCAGTCGGGGAAGcc  >  1:851504/1‑67 (MQ=255) atCGAGCAGCAGACCGATACGGGACGGCAGCGATTTCAGGAACCAGATGTGCGCAGTCGGGGAAGcc  >  1:883583/1‑67 (MQ=255) atCGAGCAGCAGACCGATACGGGACGGCAGCGATTTCAGGAACCAGATGTGCGCAGTCGGGGAAGcc  >  1:910643/1‑67 (MQ=255) atCGAGCAGCAGACCGATACGGGACGGCAGCGATTTCAGGAACCAGATGTGCGCAGTCGGGGAAGcc  >  1:920462/1‑67 (MQ=255) atCGAGCAGCAGACCGATACGGGACGGCAGCGATTTCAGGAACCAGATGTGCGCAGTCGGGGAAGcc  >  1:92157/1‑67 (MQ=255) atCGAGCAGCAGACCGATACGGGACGGCAGCGATTTCAGGAACCAGATGTGCGCAGTCGGGGAAGcc  >  1:972957/1‑67 (MQ=255) atCGAGCAGCAGACCGATACGGGACGGCAGCGATTTCAGGAACCAGATGTGCGCAGTCGGGGAAGcc  >  1:985730/1‑67 (MQ=255) atCGAGCAGCAGACCGATACGGGACGGCAGCGATTTCAGGAACCAGATGTGCGCAGTCGGGGAAGcc  >  1:1504470/1‑67 (MQ=255) atCGAGCAGCAGACCGATACGGGACGGCAGCGATTTCAGGAACCAGATGTGCGCAGTCGGGGAAGcc  >  1:1079158/1‑67 (MQ=255) atCGAGCAGCAGACCGATACGGGACGGCAGCGATTTCAGGAACCAGATGTGCGCAGTCGGGGAAGcc  >  1:1087361/1‑67 (MQ=255) atCGAGCAGCAGACCGATACGGGACGGCAGCGATTTCAGGAACCAGATGTGCGCAGTCGGGGAAGcc  >  1:1110997/1‑67 (MQ=255) atCGAGCAGCAGACCGATACGGGACGGCAGCGATTTCAGGAACCAGATGTGCGCAGTCGGGGAAGcc  >  1:1112901/1‑67 (MQ=255) atCGAGCAGCAGACCGATACGGGACGGCAGCGATTTCAGGAACCAGATGTGCGCAGTCGGGGAAGcc  >  1:1115387/1‑67 (MQ=255) atCGAGCAGCAGACCGATACGGGACGGCAGCGATTTCAGGAACCAGATGTGCGCAGTCGGGGAAGcc  >  1:1189731/1‑67 (MQ=255) atCGAGCAGCAGACCGATACGGGACGGCAGCGATTTCAGGAACCAGATGTGCGCAGTCGGGGAAGcc  >  1:1194165/1‑67 (MQ=255) atCGAGCAGCAGACCGATACGGGACGGCAGCGATTTCAGGAACCAGATGTGCGCAGTCGGGGAAGcc  >  1:1197067/1‑67 (MQ=255) atCGAGCAGCAGACCGATACGGGACGGCAGCGATTTCAGGAACCAGATGTGCGCAGTCGGGGAAGcc  >  1:130611/1‑67 (MQ=255) atCGAGCAGCAGACCGATACGGGACGGCAGCGATTTCAGGAACCAGATGTGCGCAGTCGGGGAAGcc  >  1:1309240/1‑67 (MQ=255) atCGAGCAGCAGACCGATACGGGACGGCAGCGATTTCAGGAACCAGATGTGCGCAGTCGGGGAAGcc  >  1:1431516/1‑67 (MQ=255) atCGAGCAGCAGACCGATACGGGACGGCAGCGATTTCAGGAACCAGATGTGCGCAGTCGGGGAAGcc  >  1:1462401/1‑67 (MQ=255) atCGAGCAGCAGACCGATACGGGACGGCAGCGATTTCAGGAACCAGATGTGCGCAGTCGGGGAAGcc  >  1:1070075/1‑67 (MQ=255) atCGAGCAGCAGACCGATACGGGACGGCAGCGATTTCAGGAACCAGATGTGCGCAGTCGGGGAAGcc  >  1:1545889/1‑67 (MQ=255) atCGAGCAGCAGACCGATACGGGACGGCAGCGATTTCAGGAACCAGATGTGCGCAGTCGGGGAAGcc  >  1:1563526/1‑67 (MQ=255) atCGAGCAGCAGACCGATACGGGACGGCAGCGATTTCAGGAACCAGATGTGCGCAGTCGGGGAAGcc  >  1:1605836/1‑67 (MQ=255) atCGAGCAGCAGACCGATACGGGACGGCAGCGATTTCAGGAACCAGATGTGCGCAGTCGGGGAAGcc  >  1:1624271/1‑67 (MQ=255) atCGAGCAGCAGACCGATACGGGACGGCAGCGATTTCAGGAACCAGATGTGCGCAGTCGGGGAAGcc  >  1:1675947/1‑67 (MQ=255) atCGAGCAGCAGACCGATACGGGACGGCAGCGATTTCAGGAACCAGATGTGCGCAGTCGGGGAAGcc  >  1:1700571/1‑67 (MQ=255) atCGAGCAGCAGACCGATACGGGACGGCAGCGATTTCAGGAACCAGATGTGCGCAGTCGGGGAAGcc  >  1:1725066/1‑67 (MQ=255) atCGAGCAGCAGACCGATACGGGACGGCAGCGATTTCAGGAACCAGATGTGCGCAGTCGGGGAAGcc  >  1:1785400/1‑67 (MQ=255) atCGAGCAGCAGACCGATACGGGACGGCAGCGATTTCAGGAACCAGATGTGCGCAGTCGGGGAAGcc  >  1:1797806/1‑67 (MQ=255) atCGAGCAGCAGACCGATACGGGACGGCAGCGATTTCAGGAACCAGATGTGCGCAGTCGGGGAAGcc  >  1:1854598/1‑67 (MQ=255) atCGAGCAGCAGACCGATACGGGACGGCAGCGATTTCAGGAACCAGATGTGCGCAGTCGGGGAAGcc  >  1:19111/1‑67 (MQ=255) atCGAGCAGCAGACCGATACGGGACGGCAGCGATTTCAGGAACCAGATGTGCGCAGTCGGGGAAGcc  >  1:1978234/1‑67 (MQ=255) atCGAGCAGCAGACCGATACGGGACGGCAGCGATTTCAGGAACCAGATGTGCGCAGTCGGGGAAGc   >  1:674901/1‑66 (MQ=255) atCGAGCAGCAGACCGATACGGGACGGCAGCGATTTCAGGAACCAGATGTGCGCAGTCGGGGAAGc   >  1:342616/1‑66 (MQ=255) |                                                                   ATCGAGCAGCAGACCGATACGGGACGGCAGCGATTTCAGGAACCAGATGTGCGCAGTCGGGGAAGCC  >  minE/2256651‑2256717

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑