Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2540803	2540813	11	29 [0]	[0] 10	rfaY	lipopolysaccharide core biosynthesis protein

ACTTTTATTTATTGGCTGAACGGAAAACCTTACGTTTTG  >  minE/2540814‑2540852 |                                       aCTTTTATTTCTTGGCTGAACGGAAAACCTTACGTTTTg  <  1:1539041/39‑1 (MQ=255) aCTTTTATTTATTGGCTGAACGGAAAACCTTACGTTTTg  <  1:1292889/39‑1 (MQ=255) aCTTTTATTTATTGGCTGAACGGAAAACCTTACGTTTTg  <  1:1544866/39‑1 (MQ=255) aCTTTTATTTATTGGCTGAACGGAAAACCTTACGTTTTg  <  1:1609239/39‑1 (MQ=255) aCTTTTATTTATTGGCTGAACGGAAAACCTTACGTTTTg  <  1:339719/39‑1 (MQ=255) aCTTTTATTTATTGGCTGAACGGAAAACCTTACGTTTTg  <  1:618471/39‑1 (MQ=255) aCTTTTATTTATTGGCTGAACGGAAAACCTTACGTTTTg  <  1:694467/39‑1 (MQ=255) aCTTTTATTTATTGGCTGAACGGAAAACCTTACGTTTTg  <  1:742904/39‑1 (MQ=255) aCTTTTATTTATTGGCTGAACGGAAAACCTTACGTTTTg  <  1:928560/39‑1 (MQ=255) aCTTTTATTTATTGGCTGAACGGAAAACCTTACGTTTTg  <  1:948428/39‑1 (MQ=255) |                                       ACTTTTATTTATTGGCTGAACGGAAAACCTTACGTTTTG  >  minE/2540814‑2540852

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑