Predicted mutation
evidence seq id position mutation freq annotation gene description
RA minE 880,753 G→A 100% intergenic (+72/‑122) yciM → / → pyrF conserved hypothetical protein/orotidine‑5'‑phosphate decarboxylase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*minE880,7530GA100.0% 78.8 / NA 22intergenic (+72/‑122)yciM/pyrFconserved hypothetical protein/orotidine‑5'‑phosphate decarboxylase
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (1/21);  total (1/21)
Rejected as polymorphism: Frequency below/above cutoff threshold.
Rejected as polymorphism: Variant not supported by required number of reads on each strand.

AACATACTAATTATTAATGTTCCATTGTGCTCCGGCAACGACGGCGCAGAAAAAGCCTGCCAGGGGAGAAATCGCAACTGTTAATTT  >  minE/880710‑880796
                                           |                                           
aacaTACTAATTATTAATGTTCCATTGTGCTCCGGCAACGACGACGCAGAAAAAGCCTGCCAgggg                       >  1:2091864/1‑66 (MQ=255)
                     ccATTGTGCTCCGGCAACGACTACGCAGAAAAAGCCTGCCAGGGGAGAAATCGCAACTGTTAAttt  <  1:734404/66‑1 (MQ=255)
                     ccATTGTGCTCCGGCAACGACGACGCAGAAAAAGCCTGCCAGGGGAGAAATCGCAACTGTTAAttt  <  1:2107026/66‑1 (MQ=255)
                     ccATTGTGCTCCGGCAACGACGACGCAGAAAAAGCCTGCCAGGGGAGAAATCGCAACTGTTAAttt  <  1:966254/66‑1 (MQ=255)
                     ccATTGTGCTCCGGCAACGACGACGCAGAAAAAGCCTGCCAGGGGAGAAATCGCAACTGTTAAttt  <  1:887257/66‑1 (MQ=255)
                     ccATTGTGCTCCGGCAACGACGACGCAGAAAAAGCCTGCCAGGGGAGAAATCGCAACTGTTAAttt  <  1:761971/66‑1 (MQ=255)
                     ccATTGTGCTCCGGCAACGACGACGCAGAAAAAGCCTGCCAGGGGAGAAATCGCAACTGTTAAttt  <  1:708230/66‑1 (MQ=255)
                     ccATTGTGCTCCGGCAACGACGACGCAGAAAAAGCCTGCCAGGGGAGAAATCGCAACTGTTAAttt  <  1:623430/66‑1 (MQ=255)
                     ccATTGTGCTCCGGCAACGACGACGCAGAAAAAGCCTGCCAGGGGAGAAATCGCAACTGTTAAttt  <  1:595677/66‑1 (MQ=255)
                     ccATTGTGCTCCGGCAACGACGACGCAGAAAAAGCCTGCCAGGGGAGAAATCGCAACTGTTAAttt  <  1:560864/66‑1 (MQ=255)
                     ccATTGTGCTCCGGCAACGACGACGCAGAAAAAGCCTGCCAGGGGAGAAATCGCAACTGTTAAttt  <  1:327579/66‑1 (MQ=255)
                     ccATTGTGCTCCGGCAACGACGACGCAGAAAAAGCCTGCCAGGGGAGAAATCGCAACTGTTAAttt  <  1:292758/66‑1 (MQ=255)
                     ccATTGTGCTCCGGCAACGACGACGCAGAAAAAGCCTGCCAGGGGAGAAATCGCAACTGTTAAttt  <  1:1089562/66‑1 (MQ=255)
                     ccATTGTGCTCCGGCAACGACGACGCAGAAAAAGCCTGCCAGGGGAGAAATCGCAACTGTTAAttt  <  1:2033700/66‑1 (MQ=255)
                     ccATTGTGCTCCGGCAACGACGACGCAGAAAAAGCCTGCCAGGGGAGAAATCGCAACTGTTAAttt  <  1:1652336/66‑1 (MQ=255)
                     ccATTGTGCTCCGGCAACGACGACGCAGAAAAAGCCTGCCAGGGGAGAAATCGCAACTGTTAAttt  <  1:1566402/66‑1 (MQ=255)
                     ccATTGTGCTCCGGCAACGACGACGCAGAAAAAGCCTGCCAGGGGAGAAATCGCAACTGTTAAttt  <  1:1383121/66‑1 (MQ=255)
                     ccATTGTGCTCCGGCAACGACGACGCAGAAAAAGCCTGCCAGGGGAGAAATCGCAACTGTTAAttt  <  1:127632/66‑1 (MQ=255)
                      cATTGTGCTCCGGCAACGACGACGCAGAAAAAGCCTGCCAGGGGAGAAATCGCAACTGTTAAttt  <  1:1169778/65‑1 (MQ=255)
                          gtgCTCCGGCAACGACGACGCAGAAAAAGCCTGCCAGGGGAGAAATc                <  1:2079595/47‑1 (MQ=255)
                          gtgCTCCGGCAACGACGACGCAGAAAAAGCCTGCCAGGGGAGAAATc                <  1:1687817/47‑1 (MQ=255)
                          gtgCTCCGGCAACGACGACGCAGAAAAAGCCTGCCAGGGGAGAAATc                <  1:1415619/47‑1 (MQ=255)
                                           |                                           
AACATACTAATTATTAATGTTCCATTGTGCTCCGGCAACGACGGCGCAGAAAAAGCCTGCCAGGGGAGAAATCGCAACTGTTAATTT  >  minE/880710‑880796

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: