| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | minE | 1,011,234 | A→G | 100% | H221R (CAC→CGC) | rstB → | sensory histidine kinase in two‑component regulatory system with RstA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | minE | 1,011,234 | 0 | A | G | 100.0% | 397.1 / NA | 102 | H221R (CAC→CGC) | rstB | sensory histidine kinase in two‑component regulatory system with RstA |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (0/102); total (0/102) | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 102 total aligned reads displayed.
TATCAACGCCTTAATTGCCAGCAAAAAACAGCTTATTGACGGTATCGCTCACGAACTGCGAACACCGTTAGTGCGCCTGCGTTATCGACTG > minE/1011184‑1011274 | tatCATCGCCTTAATTGCCAGCAAAAAACAGCTTATTGACGGTATCTCTCGCGAACTGCGAACACCg < 1:891471/67‑1 (MQ=255)tatCAACGCCTTAATTGCCAGCAAAAAACAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCg < 1:390111/67‑1 (MQ=255)tatCAACGCCTTAATTGCCAGCAAAAAACAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCg < 1:1521139/67‑1 (MQ=255)tatCAACGCCTTAATTGCCAGCAAAAAACAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCg < 1:1525081/67‑1 (MQ=255)tatCAACGCCTTAATTGCCAGCAAAAAACAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCg < 1:155290/67‑1 (MQ=255)tatCAACGCCTTAATTGCCAGCAAAAAACAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCg < 1:1556729/67‑1 (MQ=255)tatCAACGCCTTAATTGCCAGCAAAAAACAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCg < 1:1650481/67‑1 (MQ=255)tatCAACGCCTTAATTGCCAGCAAAAAACAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCg < 1:1761660/67‑1 (MQ=255)tatCAACGCCTTAATTGCCAGCAAAAAACAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCg < 1:1878985/67‑1 (MQ=255)tatCAACGCCTTAATTGCCAGCAAAAAACAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCg < 1:1921592/67‑1 (MQ=255)tatCAACGCCTTAATTGCCAGCAAAAAACAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCg < 1:2073027/67‑1 (MQ=255)tatCAACGCCTTAATTGCCAGCAAAAAACAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCg < 1:2091707/67‑1 (MQ=255)tatCAACGCCTTAATTGCCAGCAAAAAACAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCg < 1:2120615/67‑1 (MQ=255)tatCAACGCCTTAATTGCCAGCAAAAAACAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCg < 1:326297/67‑1 (MQ=255)tatCAACGCCTTAATTGCCAGCAAAAAACAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCg < 1:354578/67‑1 (MQ=255)tatCAACGCCTTAATTGCCAGCAAAAAACAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCg < 1:105139/67‑1 (MQ=255)tatCAACGCCTTAATTGCCAGCAAAAAACAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCg < 1:413758/67‑1 (MQ=255)tatCAACGCCTTAATTGCCAGCAAAAAACAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCg < 1:420418/67‑1 (MQ=255)tatCAACGCCTTAATTGCCAGCAAAAAACAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCg < 1:447426/67‑1 (MQ=255)tatCAACGCCTTAATTGCCAGCAAAAAACAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCg < 1:672651/67‑1 (MQ=255)tatCAACGCCTTAATTGCCAGCAAAAAACAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCg < 1:733018/67‑1 (MQ=255)tatCAACGCCTTAATTGCCAGCAAAAAACAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCg < 1:810112/67‑1 (MQ=255)tatCAACGCCTTAATTGCCAGCAAAAAACAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCg < 1:832237/67‑1 (MQ=255)tatCAACGCCTTAATTGCCAGCAAAAAACAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCg < 1:906939/67‑1 (MQ=255)tatCAACGCCTTAATTGCCAGCAAAAAACAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCg < 1:909323/67‑1 (MQ=255)tatCAACGCCTTAATTGCCAGCAAAAAACAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCg < 1:924090/67‑1 (MQ=255)tatCAACGCCTTAATTGCCAGCAAAAAACAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCg < 1:978599/67‑1 (MQ=255)tatCAACGCCTTAATTGCCAGCAAAAAACAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCg < 1:1002079/67‑1 (MQ=255)tatCAACGCCTTAATTGCCAGCAAAAAACAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCg < 1:1234263/67‑1 (MQ=255)tatCAACGCCTTAATTGCCAGCAAAAAACAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCg < 1:110252/67‑1 (MQ=255)tatCAACGCCTTAATTGCCAGCAAAAAACAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCg < 1:1444548/67‑1 (MQ=255)tatCAACGCCTTAATTGCCAGCAAAAAACAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCg < 1:1144606/67‑1 (MQ=255)tatCAACGCCTTAATTGCCAGCAAAAAACAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCg < 1:1331879/67‑1 (MQ=255)tatCAACGCCTTAATTGCCAGCAAAAAACAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCg < 1:1199554/67‑1 (MQ=255) atCAACGCCTTAATTGCCTGCAAAAAACAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCg < 1:1424184/66‑1 (MQ=255) atCAACGCCTTAATTGCCAGCAAAAAACAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCg < 1:1447394/66‑1 (MQ=255) atCAACGCCTTAATTGCCAGCAAAAAACAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCg < 1:487154/66‑1 (MQ=255) atCAACGCCTTAATTGCCAGCAAAAAACAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCg < 1:70302/66‑1 (MQ=255) atCAACGCCTTAATTGCCAGCAAAAAACAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCg < 1:708018/66‑1 (MQ=255) atCAACGCCTTAATTGCCAGCAAAAAACAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCg < 1:1696374/66‑1 (MQ=255) atCAACGCCTTAATTGCCAGCAAAAAACAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCg < 1:1192839/66‑1 (MQ=255) atCAACGCCTTAATTGCCAGCAAAAAACAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCg < 1:820485/66‑1 (MQ=255) aaTTGCCAGCAAAAAACAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCg < 1:780722/55‑1 (MQ=255) gCAAAAAACAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCg < 1:1580424/47‑1 (MQ=255) aaaaCAGCTTTTTGACGGTATCGCTCGCGAACTGCGAACACCGTTAGTGCGCCTGCGTTATCGACTg < 1:1213278/67‑1 (MQ=255) aaaaCAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCGTTAGTGCGCCTGCGTTATCGACTg < 1:685068/67‑1 (MQ=255) aaaaCAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCGTTAGTGCGCCTGCGTTATCGACTg < 1:1219858/67‑1 (MQ=255) aaaaCAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCGTTAGTGCGCCTGCGTTATCGACTg < 1:460553/67‑1 (MQ=255) aaaaCAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCGTTAGTGCGCCTGCGTTATCGACTg < 1:938814/67‑1 (MQ=255) aaaaCAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCGTTAGTGCGCCTGCGTTATCGACTg < 1:490944/67‑1 (MQ=255) aaaaCAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCGTTAGTGCGCCTGCGTTATCGACTg < 1:560035/67‑1 (MQ=255) aaaaCAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCGTTAGTGCGCCTGCGTTATCGACTg < 1:586396/67‑1 (MQ=255) aaaaCAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCGTTAGTGCGCCTGCGTTATCGACTg < 1:608010/67‑1 (MQ=255) aaaaCAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCGTTAGTGCGCCTGCGTTATCGACTg < 1:675548/67‑1 (MQ=255) aaaaCAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCGTTAGTGCGCCTGCGTTATCGACTg < 1:676609/67‑1 (MQ=255) aaaaCAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCGTTAGTGCGCCTGCGTTATCGACTg < 1:1190401/67‑1 (MQ=255) aaaaCAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCGTTAGTGCGCCTGCGTTATCGACTg < 1:1154794/67‑1 (MQ=255) aaaaCAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCGTTAGTGCGCCTGCGTTATCGACTg < 1:898470/67‑1 (MQ=255) aaaaCAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCGTTAGTGCGCCTGCGTTATCGACTg < 1:1184439/67‑1 (MQ=255) aaaaCAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCGTTAGTGCGCCTGCGTTATCGACTg < 1:720459/67‑1 (MQ=255) aaaaCAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCGTTAGTGCGCCTGCGTTATCGACTg < 1:861885/67‑1 (MQ=255) aaaaCAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCGTTAGTGCGCCTGCGTTATCGACTg < 1:747697/67‑1 (MQ=255) aaaaCAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCGTTAGTGCGCCTGCGTTATCGACTg < 1:772757/67‑1 (MQ=255) aaaaCAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCGTTAGTGCGCCTGCGTTATCGACTg < 1:400632/67‑1 (MQ=255) aaaaCAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCGTTAGTGCGCCTGCGTTATCGACTg < 1:793820/67‑1 (MQ=255) aaaaCAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCGTTAGTGCGCCTGCGTTATCGACTg < 1:80305/67‑1 (MQ=255) aaaaCAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCGTTAGTGCGCCTGCGTTATCGACTg < 1:806663/67‑1 (MQ=255) aaaaCAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCGTTAGTGCGCCTGCGTTATCGACTg < 1:1962009/67‑1 (MQ=255) aaaaCAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCGTTAGTGCGCCTGCGTTATCGACTg < 1:151894/67‑1 (MQ=255) aaaaCAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCGTTAGTGCGCCTGCGTTATCGACTg < 1:1447999/67‑1 (MQ=255) aaaaCAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCGTTAGTGCGCCTGCGTTATCGACTg < 1:1431611/67‑1 (MQ=255) aaaaCAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCGTTAGTGCGCCTGCGTTATCGACTg < 1:1688855/67‑1 (MQ=255) aaaaCAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCGTTAGTGCGCCTGCGTTATCGACTg < 1:1731267/67‑1 (MQ=255) aaaaCAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCGTTAGTGCGCCTGCGTTATCGACTg < 1:1783739/67‑1 (MQ=255) aaaaCAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCGTTAGTGCGCCTGCGTTATCGACTg < 1:1825522/67‑1 (MQ=255) aaaaCAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCGTTAGTGCGCCTGCGTTATCGACTg < 1:1856762/67‑1 (MQ=255) aaaaCAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCGTTAGTGCGCCTGCGTTATCGACTg < 1:1871178/67‑1 (MQ=255) aaaaCAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCGTTAGTGCGCCTGCGTTATCGACTg < 1:1393173/67‑1 (MQ=255) aaaaCAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCGTTAGTGCGCCTGCGTTATCGACTg < 1:1895205/67‑1 (MQ=255) aaaaCAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCGTTAGTGCGCCTGCGTTATCGACTg < 1:1356094/67‑1 (MQ=255) aaaaCAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCGTTAGTGCGCCTGCGTTATCGACTg < 1:1949970/67‑1 (MQ=255) aaaaCAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCGTTAGTGCGCCTGCGTTATCGACTg < 1:421945/67‑1 (MQ=255) aaaaCAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCGTTAGTGCGCCTGCGTTATCGACTg < 1:1295083/67‑1 (MQ=255) aaaaCAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCGTTAGTGCGCCTGCGTTATCGACTg < 1:1233962/67‑1 (MQ=255) aaaaCAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCGTTAGTGCGCCTGCGTTATCGACTg < 1:419554/67‑1 (MQ=255) aaaaCAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCGTTAGTGCGCCTGCGTTATCGACTg < 1:1515120/67‑1 (MQ=255) aaaaCAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCGTTAGTGCGCCTGCGTTATCGACTg < 1:1283775/67‑1 (MQ=255) aaaaCAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCGTTAGTGCGCCTGCGTTATCGACTg < 1:36510/67‑1 (MQ=255) aaaaCAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCGTTAGTGCGCCTGCGTTATCGACTg < 1:1999568/67‑1 (MQ=255) aaaaCAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCGTTAGTGCGCCTGCGTTATCGACTg < 1:338598/67‑1 (MQ=255) aaaaCAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCGTTAGTGCGCCTGCGTTATCGACTg < 1:285345/67‑1 (MQ=255) aaaaCAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCGTTAGTGCGCCTGCGTTATCGACTg < 1:2148490/67‑1 (MQ=255) aaaaCAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCGTTAGTGCGCCTGCGTTATCGACTg < 1:1317425/67‑1 (MQ=255) aaaaCAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCGTTAGTGCGCCTGCGTTATCGACTg < 1:2117266/67‑1 (MQ=255) aaaaCAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCGTTAGTGCGCCTGCGTTATCGACTg < 1:2117197/67‑1 (MQ=255) aaaaCAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCGTTAGTGCGCCTGCGTTATCGACTg < 1:1341460/67‑1 (MQ=255) aaaCAGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCGTTAGTGCGCCTGCGTTATCGACTg < 1:130731/66‑1 (MQ=255) aGCTTATTGACGGTATCGCTCGCGAACTGCGAACACCGTTAGTGCGCCTGCGTTATCGACTg < 1:1436110/62‑1 (MQ=255) cTTATTGACGGTATCGCTCGCGAACTGCGAACACCGTTAGTGCGCCTGCGTTATCGACTg < 1:170126/60‑1 (MQ=255) tGACGGTATCGCTCGCGAACTGCGAACACCGTTAGTGCGCCTGCGTTATCGACTg < 1:1523122/55‑1 (MQ=255) | TATCAACGCCTTAATTGCCAGCAAAAAACAGCTTATTGACGGTATCGCTCACGAACTGCGAACACCGTTAGTGCGCCTGCGTTATCGACTG > minE/1011184‑1011274 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |