Predicted mutation
evidence seq id position mutation freq annotation gene description
RA minE 2,283,783 G→T 100% L39M (CTG→ATG)  oxyR ← DNA‑binding transcriptional dual regulator

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*minE2,283,7830GT100.0% 22.9 / NA 8L39M (CTG→ATG) oxyRDNA‑binding transcriptional dual regulator
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base T (0/8);  total (0/8)
Rejected as polymorphism: Frequency below/above cutoff threshold.
Rejected as polymorphism: Variant not supported by required number of reads on each strand.

CTGGGTGAACAACACTTTACGGCTGGTCCGCTCCAGCAACATCACGCCCAGCTCATCTTCCAGCTTA  >  minE/2283721‑2283787
                                                              |    
cTGGGTGAACAACACTTTACGGCTGGTCCGCTCCAGCAACATCACGCCCAGCTCATCTTCCATCTTa  <  1:1245535/67‑1 (MQ=255)
cTGGGTGAACAACACTTTACGGCTGGTCCGCTCCAGCAACATCACGCCCAGCTCATCTTCCATCTTa  <  1:135078/67‑1 (MQ=255)
cTGGGTGAACAACACTTTACGGCTGGTCCGCTCCAGCAACATCACGCCCAGCTCATCTTCCATCTTa  <  1:1352007/67‑1 (MQ=255)
cTGGGTGAACAACACTTTACGGCTGGTCCGCTCCAGCAACATCACGCCCAGCTCATCTTCCATCTTa  <  1:1541620/67‑1 (MQ=255)
cTGGGTGAACAACACTTTACGGCTGGTCCGCTCCAGCAACATCACGCCCAGCTCATCTTCCATCTTa  <  1:337780/67‑1 (MQ=255)
cTGGGTGAACAACACTTTACGGCTGGTCCGCTCCAGCAACATCACGCCCAGCTCATCTTCCATCTTa  <  1:889876/67‑1 (MQ=255)
 tGGGTGAACAACACTTTACGGCTGGTCCGCTCCAGCAACATCACGCCCAGCTCATCTTCCATCTTa  <  1:2121173/66‑1 (MQ=255)
                         gTCCGCTCCAGCAACATCACGCCCAGCTCATCTTCCATCTTa  <  1:1887650/42‑1 (MQ=255)
                                                              |    
CTGGGTGAACAACACTTTACGGCTGGTCCGCTCCAGCAACATCACGCCCAGCTCATCTTCCAGCTTA  >  minE/2283721‑2283787

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: