| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 208483 | 98 (1.550) | 7 (0.120) | 3/94 | NT | 6.9% | coding (493/804 nt) | dkgB | 2,5‑diketo‑D‑gluconate reductase B |
| ? | minE | = 208508 | 98 (1.650) | coding (518/804 nt) | dkgB | 2,5‑diketo‑D‑gluconate reductase B | |||||
GCTGCTGTTGGTGCTGAAAACATCGCTACTAACCAGATTGAACTCTCTCCTTATCTGCAAAACCGTAAAGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/208411‑208483‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggATGCCGTGCTGTTTAGCCCAGGCAACCACTTTACGGTTTTGCAGATAAGGAGAGAGTTCAATCTGGT < minE/208508‑208442 GCTGCTGTTGGTGCTGAAAACATCGCTACTAACCAGATTGAACTCTCTCCTTATCTGCAAAACCGTAAAGT > 1:1417270/1‑71GCTGCTGTTGGTGCTGAAAACATCGCTACTAACCAGATTGAACTCTCTCCTTATCTGCAAAACCGTAAAGT > 1:3792395/1‑71GCTGCTGTTGGTGCTGAAAACATCGATACTAACCAGATTGAACTCTCTCCTTATCTGCAAAACCGTAAAGT > 1:1226794/1‑71 CTGTTGGTGCTGAAAACATCGCTACTAACCAGATTGAACTCTCTCCTTATCTGCAAAACCGTAAAGTGG < 1:3136207/69‑1 CTGTTGGTGCTGAAAACATCGCTACTAACCAGATTCAACTCTCTCCTTATCTGCAAAACCGTAAAGTGG < 1:4204615/69‑1 CTGAAAACATCGCTACTAACCAGATTGAACTCTCTCCTTATCTGCAAAACCGTAAAGTGG < 1:3898104/60‑1 CTGAAAACATCGCTACTAACCAGATTGAACTCTCTCCTTATCTGCAAAACCGTAAAGTGG < 1:2727515/60‑1 CTGAAAACATCGCTACTAACCAGATTGAACTCTCTCCTTATCTGCAAAACCGTAAAGTGG < 1:2934142/60‑1 CTGAAAACATCGCTACTAACCAGATTGAACTCTCTCCTTATCTGCAAAACCGTAAAGTGG < 1:2090235/60‑1 CTGAAAACATCGCTACTAACCAGATTGAACTCTCTCCTTATCTGCAAAACCGTAAAGTGG < 1:206900/60‑1 CTGAAAACATCGCTACTAACCAGATTGAACTCTCTCCTTATCTGCAAAACCGTAAAGT < 1:3802659/58‑1 CTGAAAACATCGCTACTAACCAGATTGAACTCTCTCCTTATCTGCAAAACCGTAAAGT < 1:4134849/58‑1 CTGAAAACATCGCTACTAACCAGATTGAACTCTCTCCTTATCTGCAAAACCGTAAAGT < 1:2609814/58‑1 GAAAACATCGCTACTAACCAGATTGAACTCTCTCCTTATCTGCAAAACCGTAAAGTGG > 1:3825847/1‑58 GAAAACATCGCTACTAACCAGATTGAACTCTCTCCTTATCTGCAAAACCGTAAAGTGG > 1:2858680/1‑58 TACTAACCAGATTGAACTCTCTCCTTATCTGCAAAACCGTAAAGTGGATGCCGTGCTGTTTAGCCCAGGC > 1:2574896/1‑70 TACTAACCAGATTGAACTCTCTCCTTATCTGCAAAACCGTAAAGTGGATGCCGTGCTGTTTAGCCCAGG > 1:2016245/1‑69 CAGATTGAACTCTCTCCTTATCTGCAAAACCGTAAAGTGGATGCCGTGCTGTTTAGCCCAGGCAACCACTT < 1:1974493/71‑1 CAGATTGAACTCTCTCCTTATCTGCAAAACCGTAAAGTGGATGCCGTGCTGTTTAGCCCAGGCAACCACTT < 1:3854458/71‑1 tATTGAACTCTCTCCTTATCTGCAAAACCGTAAAGT < 1:2519316/35‑1 ATTGAACTCTCTCCTTATCTGCAAAACCGTAATATGGATGCCGTGCTGTTTAGCCCAGGCAACCACTTTAC < 1:2708812/71‑1 ATTGAACTCTCTCCTTATCTGCAAAACCGTAATATGGATGCCGTGCTGTTTAGCCCAGGCAACCACTTTAC < 1:2638928/71‑1 ATTGAACTCTCTCCTTATCTGCAAAACCGTAATATGGATGCCGTGCTGTTTAGCCCAGGCAACCACTTTAC < 1:2257111/71‑1 TGGATGCCGTGCTGTTTAGCCCAGGCAACCACTTTACGGTTTTGCAGATAAGGAGAGAGTTCAATCTGGT > 1:1132090/1‑70 TGGATGCCGTGCTGTTTAGCCCAGGCAACCACTTTACGGTTTTGCAGATAAGGAGAGAGTTCAATCAGGT > 1:4030113/1‑70 TGGATGCCGTGCTGTTTAGCCCAGGCAACCACTTTACGGTTTTGCAGATAAGGAGAGAGT > 1:1669031/1‑60 TGGATGCCGTGCTGTTTAGCCCAGGCAACCACTTTACGGTTTTG < 1:1219363/44‑1 TGGATGACGTGCTGTTTAGCCCAGGCAACCACTTTACGGTTTTG < 1:1944906/44‑1 GATGCCGTGCTGTTTAGCCCAGGCAACCACTTTACGGTTTTGCAGATAAG < 1:1156301/50‑1 GATGCCGTGCTGTTTAGCCCAGGCAACCACTTTACGGTTTTGCAGATAAG < 1:1686442/50‑1 GATGCCGTGCTGTTTAGCCCAGGCAACCACTTTACGGTTTTGCAGATAAG < 1:1645144/50‑1 GATGCCGTGCTGTTTAGCCCAGGCAACCACTTTACGGTTTTGCA > 1:2525108/1‑44 GATGCCGTGCTGTTTAGCCCAGGCAACCACTTTACGGTTTTGCA > 1:825160/1‑44 GCTGCTGTTGGTGCTGAAAACATCGCTACTAACCAGATTGAACTCTCTCCTTATCTGCAAAACCGTAAAGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/208411‑208483‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggATGCCGTGCTGTTTAGCCCAGGCAACCACTTTACGGTTTTGCAGATAAGGAGAGAGTTCAATCTGGT < minE/208508‑208442 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |