| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 344370 = | 80 (1.260) | 49 (1.020) +CCTTTTTCGGTG |
5/76 | NT | 40.8% | intergenic (‑128/‑18) | ybbK/ybbL | predicted protease, membrane anchored/predicted transporter subunit |
| ? | minE | 2323857 = | 107 (1.690) | coding (497/963 nt) | pfkA | 6‑phosphofructokinase I | |||||
TGTTCCCTTTTTCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/344384‑344370‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACGGAAATACGCTGGTGAGAAG > minE/2323857‑2323878 |||||||||||| gtTTCCCTTTTTCTGCCTTTTTCGGTGACGGAAATACGCT < 1:3095788/38‑1gtTTCCCTTTTTCTGCCTTTTTCGGTGACGGAAATACGCT < 1:3069914/38‑1gtTTCCCTTTTTCTGCCTTTTTCGGTGACGGAAATACGCT < 1:2653094/38‑1gtTTCCCTTTTTCTGCCTTTTTCGGTGACGGAAATACGCT < 1:2609354/38‑1gtTTCCCTTTTTCTGCCTTTTTCGGTGACGGAAATACGCT < 1:1866736/38‑1gtTTCCCTTTTTCTGCCTTTTTCGGTGACGGAAATACGCT > 1:1559290/3‑40 tTTCCCTTTTTCTGCCTTTTTCGGTGACGGAAATACGCTt < 1:959652/39‑2 tTTCCCTTTTTCTGCCTTTTTCGGTGACGGAAATACGCTt < 1:2095531/39‑2 tTTCCCTTTTTCTGCCTTTTTCGGTGACGGAAATACGCTt < 1:1845264/39‑2 tTTCCCTTTTTCTGCCTTTTTCGGTGACGGAAATACGCT > 1:3190591/2‑39 tTTCCCTTTTTCTGCCTTTTTCGGTGACGGAAATACGCT > 1:2967795/2‑39 tTTCCCTTTTTCTGCCTTTTTCGGTGACGGAAATACGCT > 1:734313/2‑39 tTTCCCTTTTTCTGCCTTTTTCGGTGACGGAAATACGCT > 1:1503403/2‑39 tTTCCCTTTTTCTGCCTTTTTCGGTGACGGAAATACG < 1:1423493/36‑1 tTTCCCTTTTTCTGCCTTTTTCGGTGACGGAAATACG < 1:1262566/36‑1 tTTCCCTTTTTCTGCCTTTTTCGGTGACGGAAATACG < 1:100846/36‑1 tTTCCCTTTTTCTGCCTTTTTCGGTGACGGAAATACG < 1:2394914/36‑1 tTTCCCTTTTTCTGCCTTTTTCGGTGACGGAAATACG < 1:2319487/36‑1 tTTCCCTTTTTCTGCCTTTTTCGGTGACGGAAATACG < 1:1411258/36‑1 TTCCCTTTTTCTGCCTTTTTCGGTGACGGAAATACGCTtc > 1:2187688/1‑38 TTCCCTTTTTCTGCCTTTTTCGGTGACGGAAATACGCTtc > 1:3078407/1‑38 TTCCCTTTTTCTGCCTTTTTCGGTGACGGAAATACGCTtc > 1:2540431/1‑38 TTCCCTTTTTCTGCCTTTTTCGGTGACGGAAATACGCT > 1:2696136/1‑38 TTCCCTTTTTCTGCCTTTTTCGGTGACGGAAATACGCT < 1:105917/38‑1 TTCCCTTTTTCTGCCTTTTTCGGTGACGGAAATACGCT < 1:868375/38‑1 TTCCCTTTTTCTGCCTTTTTCGGTGACGGAAATACGCT < 1:3051824/38‑1 TTCCCTTTTTCTGCCTTTTTCGGTGACGGAAATACGCT < 1:1134252/38‑1 TTCCCTTTTTCTGCCTTTTTCGGTGACGGAAATACGCT < 1:2953708/38‑1 TTCCCTTTTTCTGCCTTTTTCGGTGACGGAAATACGCT < 1:2714026/38‑1 TTCCCTTTTTCTGCCTTTTTCGGTGACGGAAATACGCT < 1:3834234/38‑1 TTCCCTTTTTCTGCCTTTTTCGGTGACGGAAATACGCT < 1:4020363/38‑1 TTCCCTTTTTCTGCCTTTTTCGGTGACGGAAATACGCT > 1:2521678/1‑38 TTCCCTTTTTCTGCCTTTTTCGGTGACGGAAATACGCT > 1:400591/1‑38 TTCCCTTTTTCTGCCTTTTTCGGTGACGGAAATACGCT < 1:3646453/38‑1 TTCCCTTTTTCTGCCTTTTTCGGTGACGGAAATAC > 1:867060/1‑35 TTCCCTTTTTCTGCCTTTTTCGGTGACGGAAATAC < 1:2547885/35‑1 TTCCCTTTTTATGCCTTTTTCGGTGACGGAAATACGCT < 1:934637/38‑1 TTCCCTATTTCTGCCTTTTTCGGTGACGGAAATACG > 1:3250514/1‑36 TCCCTTTTTCTGCCTTTTTCGGTGACGGAAATACGCT > 1:4007197/1‑37 TCCCTTTTTCTGCCTTTTTCGGTGACGGAAATACGCT < 1:531805/37‑1 TCCCTTTTTCTGCCTTTTTCGGTGACGGAAATACGC > 1:2334585/1‑36 TCCCTTTTTCTGCCTTTTTCGGTGACGGAAATACGC > 1:2195695/1‑36 TCCCTTTTTCTGCCTTTTTCGGTGACGGAAATACGC > 1:1943816/1‑36 TCCCTTTTTCTGCCTTTTTCGGTGACGGAAATACGC > 1:621109/1‑36 TCCCTTTTTCTGCCTTTTTCGGTGACGGAAATACGC > 1:1191216/1‑36 CCCTTTTTCTGCCTTTTTCGGTGACGGAAATACGCT < 1:1856447/36‑1 CCCTTTTTCTGCCTTTTTCGGTGACGGAAATACGC > 1:2136489/1‑35 CCCTTTTTCTGCCTTTTTCGGTGACGGAAATACGC > 1:1033000/1‑35 TTTCTGCCTTTTTCGGTGACGGAAATACGCTTGAGAGAcc > 1:1063586/1‑38 |||||||||||| TGTTCCCTTTTTCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/344384‑344370‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACGGAAATACGCTGGTGAGAAG > minE/2323857‑2323878 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |