| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 1271403 | 49 (0.770) | 10 (0.180) | 3/88 | NT | 19.2% | coding (854/1695 nt) | yedQ | predicted diguanylate cyclase |
| ? | minE | = 1271414 | 41 (0.740) | coding (843/1695 nt) | yedQ | predicted diguanylate cyclase | |||||
CAAGGCCAGTTCACGAGGATCAAAAATATTCCCTGTTGGATGGTCAGGATTGGAAGAGGTCAAAAATCTCAGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/1271330‑1271403‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcagctCTATGACAGTAAGCTGAGATTTTTGACCTCTTCCAATCCTGACCATCCAACAGGGAATATTTTTGATCC < minE/1271414‑1271346 CAAGGCCAGTTCACGAGGATCAAAAATATTCCCTGTTGGATGGTCAGGATTGGAAGAGGTCAAAAATCTCA < 1:3285976/71‑1 ACGAGGATCAAAAATATTCCCTGTTGGATGGTCAGGATTGGAAGAGGTCAAAAATCTCAGCTCTATGAC < 1:810279/69‑1 ACGAGGATCAAAAATATTCCCTGTTGGATGGTCAGGATTGGAAGAGGTCAAAAATCTCAGCTCTATGAC < 1:2052230/69‑1 AAATATTCCCTGTTGGATGGTCAGGATTGGAAGAGGTCAAAAATCTCAG > 1:379274/1‑49 AAATATTCCCTGTTGGATGGTCAGGATTGGAAGAGGTCAAAAATCTCAG > 1:2963227/1‑49 AAATATTCCCTGTTGGATGGTCAGGATTGGAAGAGGTCAAAAATCTCAG > 1:2184049/1‑49 ATATTCCCTGTTGGATGGTCAGGATTGGAAGAGGTCAAAAATCTCAG > 1:1513628/1‑47 ATATTCCCTGTTGGATGGTCAGGATTGGAAGAGGTCAAAAATCTCAG > 1:1646775/1‑47 CTGTTGGATGGTCAGGATTGGAAGAGGTCAAAAATCTCAGCTCTATGACAGTAAGC < 1:3003172/56‑1 CTGTTGGATGGTCAGGATTGGAAGAGGTCAAAAATCTCAGCTCTATGACAGTAAGC < 1:2149679/56‑1 GTTGGATGGTCAGGATTGGAAGAGGTCAAAAATCTCAGCTCTATGACAGTAAGC < 1:98543/54‑1 CAGGATTGTAAGAGGTCAAAAATCTCAGCTCTATGACAGTAAGCTGA > 1:2042028/1‑47 CAGGATTGGAAGAGGTCAAAAATCTCAGCTCTATGACAGTAAGCTGAG > 1:2144551/1‑48 CAGGATTGGAAGAGGTCAAAAATCTCAGCTCTATGACAGTAAGCTGAG > 1:3225265/1‑48 CAGGATTGGAAGAGGTCAAAAATCTCAGCTCTATGACAGTAAGCTGAG > 1:1849629/1‑48 CAGGATTGGAAGAGGTCAAAAATCTCAGCTCTATGACAGTAAGCTGAG > 1:1742326/1‑48 TCAGCTCTATGACAGTAAGCTGAGATTTTTGACCTCTTCCAATCCTGACCATCCAACAGGGAATATTTTTG < 1:175868/71‑1 AGCTCTATGACAGTAAGCTGAGATTTTTGACCTCTTCCAATCCTGACCATCCAACAGGGAATATTTTTGAT < 1:2255385/71‑1 AGCTCTATGACAGTAAGCTGAGATTTTTGACCTCTTCCAATCCTGACCATCCAACAGGGAATATTTTTGAT > 1:3627946/1‑71 AGCTCTATGACAGTAAGCTGAGATTTTTGACCTCTTCCAATCCTGACCATCCAACAGGGAATATTTTTGAT > 1:559843/1‑71 AGCTCTATGACAGTAAGCTGAGATTTTTGACCTCTTCCAATCCTGACCATCCAACAGGGAATATTTTTGAT < 1:1604083/71‑1 CTCTATGACAGTAAGCTGAGATTTTTGACCTCTTCCAATCCTGACCAT > 1:3623784/1‑48 CTCTATCACAGTAAGCTGAGATTTTTGACCTCTTCCAATCCTGACCATCCAACAGGGAATATTTTTGATCC > 1:548507/1‑71 TCTATGACAGTAAGCTGAGATTTTTGACCTCTTCCAATCCTGACCATCCAACAGGGAATATT < 1:4197122/62‑1 CAAGGCCAGTTCACGAGGATCAAAAATATTCCCTGTTGGATGGTCAGGATTGGAAGAGGTCAAAAATCTCAGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/1271330‑1271403‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcagctCTATGACAGTAAGCTGAGATTTTTGACCTCTTCCAATCCTGACCATCCAACAGGGAATATTTTTGATCC < minE/1271414‑1271346 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |