| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 1515502 = | 57 (0.900) | 5 (0.090) | 3/90 | NT | 8.9% | intergenic (‑12/+25) | purF/cvpA | amidophosphoribosyltransferase/membrane protein required for colicin V production |
| ? | minE | 1515555 = | 51 (0.890) | coding (461/489 nt) | cvpA | membrane protein required for colicin V production | |||||
GTTTTTTTGATTATCTGCAAAGCTCGTCAAGTTTCTTGCCCAGAGCGTAAGTGCTCTGAGATGTGGCTTAACGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/1515576‑1515502‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acgagCTTTGCAGATAATCAAAAAAACATCTGATGATAAAACTGAATTGCGGGATCAGCTGTGATTTGCTCCA > minE/1515555‑1515622 GTTTTTTTGATTATCTGCAAAGCTCGTCAAGTTTCTTGCCCAGAGCGTAAGTGCTCTGAGATGTGGCTTAA > 1:419401/1‑71 TTTTTGATTATCTGCAAAGCTCGTCAAGTTTCTTGCCCAGAGCGTAAGTGCTCTGAGATGTGGCTTAAC > 1:2008469/1‑69 TTTTTGATTATCTGCAAAGCTCGTCAAGTTTCTTGCCCAGAGCGTAAGTGCTCTGAGATGTGGCTTAAC > 1:2838798/1‑69 TTTTTGATTATCTGCAAAGCTCGTCAAGTTTCTTGCCCAGAGCGTAAGTGCTCTGAGATGTGGCTTAAC > 1:3666569/1‑69 TTTTTGATTATCTGCAAAGCTCGTCAAGTTTCTTGCCCAGAGCGTAAGTGCTCTGAGATGTGGCTTAAC > 1:3878253/1‑69 TTTTTGATTATCTGCAAAGCTAGTCAAGTTTCTTGCCCAGAGCGTAAGTGCTCTGAGATGTGGCTTAAC > 1:845822/1‑69 TTTTGATTATCTGCAAAGCTCGTCAAGTTTCTTGCCCAGAGCGTAAGTGCTCTGAGATGTGGCTTAACGAG > 1:3501819/1‑71 TGCAAAGCTCGTCAAGTTTCTTGCCCAGAGCGTAAGTGCTCTGAGATGTGGCTTAACGAGCTTTGCAGAT > 1:2299776/1‑70 TGCAAAGCTCGTCAAGTTTCTTGCCCAGAGCGTAAGTGCTCTGAGATGTGGCTTAACGAGCTTTGCAGAT > 1:3402176/1‑70 GTTTCTTGCCCAGAGCGTAAGTGCTCTGAGATGTGGCTTAACGAGCTTTGCAGATAATCAAAAAAACAT < 1:1988281/69‑1 TTCTTGCCCAGAGCGTAAGTGCTCTGAGATGTGGCTTAACGAGCTTTGCAGATAATCAAAAAAACATCT > 1:1420014/1‑69 TTCTTGCCCAGAGCGTAAGTGCTCTGAGATGTGGCTTAACGAGCTTTGCAGATAATCAAAAAAACATCT > 1:3740880/1‑69 GAGCTTTGCAGATAATCAAAAAAACATCTGATGATAAAACTGAATTGCGGGATCAGCTGTGATTTGCTCCA < 1:1842499/71‑1 GTTTTTTTGATTATCTGCAAAGCTCGTCAAGTTTCTTGCCCAGAGCGTAAGTGCTCTGAGATGTGGCTTAACGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/1515576‑1515502‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acgagCTTTGCAGATAATCAAAAAAACATCTGATGATAAAACTGAATTGCGGGATCAGCTGTGATTTGCTCCA > minE/1515555‑1515622 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |