| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 1574751 | 49 (0.770) | 7 (0.130) | 3/86 | NT | 13.1% | coding (785/885 nt) | xapR | DNA‑binding transcriptional activator |
| ? | minE | = 1574788 | 51 (0.940) | coding (748/885 nt) | xapR | DNA‑binding transcriptional activator | |||||
TAACCATCGCGGGCGTCACCTGCTGTGTTTCATAAACAATATATAAATCTGCAGGGATGCGCTGTTTGAGCGGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/1574677‑1574751‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcggacAGCTACGCACAAATGAACTGGCCAGGTGTCATTTTCCGTCCGCTCAAACAGCGCATCCCTGCAGATTTA < minE/1574788‑1574720 TAACCATCGCGGGCGTCACCTGCTGTGTTTCATAAACAATATATAAATCTGCAGGGATGCGCTGTTTGAGC > 1:3300028/1‑71TAACCATCGCGGGCGTCACCTGCTGTGTTTCATAAACAATATATAAATCTGCAGGGATGCGCTGTTTGAGC > 1:962338/1‑71 ACCTGCTGTGTTTCATAAACAATATATAAATCTGCAGGGATGCGCTGTTTGAGCGGACAGCTACGCACAAA > 1:2023748/1‑71 ACCTGCTGTGTTTCATAAACAATATATAAATCTGCAGGGATGCGCTGTTTGAGCGGACAGCTACGCACAAA > 1:4193157/1‑71 ACCTGCTGTGTTTAATAAACAATATATAAATCTGCAGGGATGCGCTGTTTGAGCGGACAGCTACGCACAAA > 1:3467523/1‑71 TTCATAAACAATATATAAATCTGCAGGGATGCGCTGTTTGAGCGGACAGCTACGCACAAATGAACTGGC > 1:2088352/1‑69 TTCATAAACAATATATAAATCTGCAGGGATGCGCTGTTTGAGCGGACAGCTACGCACAAATGAACTGG > 1:1162865/1‑68 TCATAAACAATATATAAATCTGCAGGGATGCGCTGTTTGAG > 1:2740302/1‑41 CAGGGATGCGCTGTTTGAGCGGACAGCTACGCACAAATGAACTGGCCAGGTGTCATTTTCCGTCCGCTCA < 1:2301656/70‑1 CAGGGATGCGCTGTTTGAGCGGACAGCTACGCACAAATGAACTGGCCAGGTGTCATTTTCCGTCCGCTCA < 1:453111/70‑1 ACAGCTACGCACAAATGAACTGTCCAGGTGTCATTTTCCGTCCGCTCAAACAGCGCATCCCTGCAGATTTA < 1:3156981/71‑1 ACAGCTACGCACAAATGAACTGGCCAGGTTTCATTTTCCGTCCGCTCAAACAGCGCATCCCTGCAGATTTA < 1:20588/71‑1 ACAGCTACGCACAAATGAACTGGCCAGGTGTCATTTTCCGTCCGCTCAAACAGCGCATCCCTGCAGATTTA < 1:3542225/71‑1 TAACCATCGCGGGCGTCACCTGCTGTGTTTCATAAACAATATATAAATCTGCAGGGATGCGCTGTTTGAGCGGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/1574677‑1574751‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcggacAGCTACGCACAAATGAACTGGCCAGGTGTCATTTTCCGTCCGCTCAAACAGCGCATCCCTGCAGATTTA < minE/1574788‑1574720 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |