| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 1993269 | 66 (1.040) | 8 (0.150) | 3/84 | NT | 10.8% | coding (562/1257 nt) | nupG | nucleoside transporter |
| ? | minE | = 1993315 | 77 (1.450) | coding (608/1257 nt) | nupG | nucleoside transporter | |||||
GTATATTGGCGCAGCACTTTCCGCCATTCTGGTTCTGTTTACCCTGACTCTGCCGCATATTCCGGTTGCTAAACAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/1993193‑1993269‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taaacagcGCGAATGCATCGAGGCCCAGCAGGGTTGTCCAGCTCTGATTCGCTTGCTGTTTAGCAACCGGAATAT < minE/1993315‑1993249 GTATATTGGCGCAGCACTTTCCGCCATTCTGGTTCTGTTTACCCTGACTCTGCCGCATATTCCGGTTGCT > 1:3295921/1‑70GTATATTGGCGCAGCACTTTCCGCCATTCTGGTTCTGTTTACCCTGACTCTGCCGCATATTCCGGTTGCT > 1:964439/1‑70 TATATTGGCGCAGCACTTTCCGCCATTCTGGTTCTGTTTACCCTGACTCTGCCGCATATTCCGGTTGCTA < 1:2236931/70‑1 TGGCGCAGCCCTTTCCGCCATTCTGGTTCTGTTTACCCTGACTCTGCCGCATATTCCGGTTGCTAAACAG > 1:830090/1‑70 TGGCGCAGCACTTTCCGCCATTCTGGTTCTGTTTACCCTGACTCTGCCGCATATTCCGGTTGCTAAACAG > 1:2596451/1‑70 GGCGCAGCACTTTCCGCCATTCTGGTTCTGTTTACCCTGACTCTGCCGCATATTCCGGTTGCTAAACAGC > 1:922361/1‑70 ACTCTGCCGCATATTCCGGTTGCTAAACAGCGCGAATGCATCGAGGCCCAGCAGGGTTGTCCAGCTCT < 1:432056/68‑1 ACTCTGCCGCATATTCCGGTTGCTAAACAGCGCGAATGCATCGAGGCCCAGCAGGGTTGTCCAGCTCT < 1:2892831/68‑1 TCTGCCGCATATTCCGGTTGCTAAACAGCGCGAATGCATCGAGGCCCAGCAGGGTTGTCCAGCTCTGA > 1:893000/1‑68 TCTGCCGCATATTCCGGTTGCTAAACAGCGCGAATGCATCGAGGCCCAGCAGGGTTGTCCAGCTCTGA > 1:3311334/1‑68 CTGCCGCATATTCCGGTTGCTAAACAGCGCGAATGCATCGAGGCCCAGCAGGGTTGTCCAGCTCTGATTCG > 1:1294277/1‑71 CTGCCGCATATTCCGGTTGCTAAACAGCGCGAATGCATCGAGGCCCAGCAGGGTTGTCCAGCTCTGATTCG > 1:2419121/1‑71 CTGCCGCATATTCCGGTTGCTAAACAGCGCGAATCCATCGAGGCCCAGCAGGGTTGTCCAGCTCTGATTCG > 1:856443/1‑71 GCATATTCCGGTTGCTAAACAGCGCGAATGCATCGAGGCCCAGCAGGGTTGTCCAGCTCT < 1:467480/60‑1 TAAACAGCGCGAATGCATCGAGGCCCAGCAGGGTTGTCCAGCTCTGATTCGCTTGCTGTTTAGCAACCGG < 1:1063167/70‑1 TAAACAGCGCGAATGCATCGAGGCCCAGCAGGGTTGTCCAGCTCTGATTCGCTTGCTGTTTAGCAACCGG > 1:2488343/1‑70 TAAACAGCGCGAATGCATCGAGGCCCAGCAGGGTTGTCCAGCTCTGATTCGCTTGCTGTTTAGCAACCGG > 1:4002020/1‑70 TAAACAGCGCGAATGCATCGAGGCCCAGCAGGGTTGTCCAGCTCTGATTCGCTTGCTGTTTAGCAACCGG < 1:1638001/70‑1 AAACAGCGCGAATGCATCGAGGCCCAGCAGGGTTGTCCAGCTCTGATTCGCTTGCTGTTTAGCAACCGGAA > 1:3793398/1‑71 AAACAGCGCGAATGCATCGAGGCCCAGCAGGGTTGTCCA < 1:530229/39‑1 AAACAGCGCGAATGCATCGAGGCCCAGCAGGGTTGTCCA < 1:870708/39‑1 AACAGCGCGAATGCATCGAGGCCCAGCAGGGTTGTCCAGCTCTGATTCGCTTGCTGTTTAGCAACCGGAA < 1:2563352/70‑1 AACAGCGCGAATGCATCGAGGCCCAGCAGGGTTGTCCAGCTCTGATTCGCTTGCTGTTTAGCAACCGGAA < 1:2469684/70‑1 ACAGCGCGAATGCATCGAGGCCCAGCAGGGTTGTCCAGC > 1:2985364/1‑39 ACAGCGCGAATGCATCGAGGCCCAGCAGGGTTGTCCAGC > 1:1564205/1‑39 CAGCGCGAATGCATCGAGGCCCAGCAGGGTTGTCCAGCTCTGATTCGCTTGCTGTTTAGCAACCGGAATAT > 1:2507785/1‑71 AGCGCGAATGCATCGAGGCCCAGCAGGGTTGTCCAGCTCTGATTCGCTTGCTGTTTAGCAACCGGAATA > 1:99133/1‑69 AGCGCGAATGCATCGAGGCCCAGCAGGGTTGTCCAGCTCTGATTCGCTTGCTGTTTAGCAACCGGAATA > 1:3111790/1‑69 AGCGCGAATGCATCGAGGCCCAGCAGGGTTGTCCAG > 1:3205216/1‑36 AGCGCGAATGCATCGAGGCCCAGCAGGGGTGTCCAGCTCTGATTCGCTTGCTGTTTAGCAACCGGAATA > 1:2917327/1‑69 GTATATTGGCGCAGCACTTTCCGCCATTCTGGTTCTGTTTACCCTGACTCTGCCGCATATTCCGGTTGCTAAACAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/1993193‑1993269‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taaacagcGCGAATGCATCGAGGCCCAGCAGGGTTGTCCAGCTCTGATTCGCTTGCTGTTTAGCAACCGGAATAT < minE/1993315‑1993249 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |