| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 253065 = | 45 (0.950) | 5 (0.130) +GACCAACAC |
3/84 | NT | 9.4% | coding (357/453 nt) | yafP | predicted acyltransferase with acyl‑CoA N‑acyltransferase domain |
| ? | W3110S.gb | 3313367 = | 72 (1.510) | coding (2503/2673 nt) | infB | fused protein chain initiation factor 2, IF2 | |||||
CCGTTACGGACTTCGTTAACGTCATCTTTGAAGCGGCGCAGGGACTCCAGCTCGCCTTCGTAGATAACCACGTTGTCACGCAGAACGCGGATCGGGTTGTGACGTTTAACCACACCTTCGGTAACCATACAGCCTGCGATG > W3110S.gb/3313297‑3313437 | ccGTTACGGACTTCGTTAACGTCATCTTTGAAGCGGCGCAGGGACTCCAGCTCGCCTTCGTAGATAACCAc > 1:3136903/1‑71 (MQ=255) aCGGACTTCGTTAACGTCATCTTTGAAGCGGCGCAGGGACTCCAGCTCGCCTTCGTAGATAACCACGTTg < 1:63831/70‑1 (MQ=255) cGGACTTCGTTAACGTCATCTTTGAAGCGGCGCAGGGACTCCAGCTCGCCTTCGTAGATAACCACGTTGt < 1:3208695/70‑1 (MQ=255) cGGACTTCGTTAACGTCATCTTTGAAGCGGCGCAGGGACTCCAGCTCGCCTTCGTAGATAACCACGTTGt < 1:462209/70‑1 (MQ=255) ggACTTCGTTAACGTCATCTTTGAAGCGGCGCAGGGACTCCAGCTCGCCTTCGTAGATAACCACGTTGt < 1:2394382/69‑1 (MQ=255) aCTTCGTTAACGTCATCTTTGAAGCGGCGCAGGGACTCCAGCTCGCCTTCGTAGATAACCACGTTGTCACg > 1:4435538/1‑71 (MQ=255) cGTTAACGTCATCTTTGAAGCGGCGCAGGGACTCCAGCTCGCCTTCGTAGATAACCACGTTGTCACGCAg > 1:1937501/1‑70 (MQ=255) cGTTAACGTCATCTTTGAAGCGGCGCAGGGACTCCAGCTCGCCTTCGTAGATAACCACGTTGTCACGCAg < 1:1645019/70‑1 (MQ=255) cGTTAACGTCATCTTTGAAGCGGCGCAGGGACTCCAGCTCGCCTTCGTAGA‑AACCACGt > 1:3488845/1‑59 (MQ=255) gTTAACGTCATCTTTGAAGCGGCGCAGGGACTCCAGCTCGCCTTCGTAGATAACCACGTTGTCACGCAGaa > 1:2808694/1‑71 (MQ=255) ttAACGTCATCTTTGAAGCGGCGCAGGGACTCCAGCTCGCCTTCGTAGATAACCACGTTg < 1:1541622/60‑1 (MQ=255) ttAACGTCATCTTTGAAGCGGAGCAGGGACTCCAGCTCGCCTTCGTAGATAACCACGTTGTCACGCAGa > 1:4112781/1‑69 (MQ=255) aCGTCATCTTTGAAGCGGCGCAGGGACTCCAGCTCGCCTTCGTAGATAACCACGTTGTCACGCAGAAcgcg < 1:2807103/71‑1 (MQ=255) aCGTCATCTTTGAAGCGGCGCAGGGACTCCAGCTCGCCTTCGTAGATAACCACGTTGTCACGCAGAAcgcg < 1:1061434/71‑1 (MQ=255) cGTCATCTTTGAAGCGGCGCAGGGACTCCAGCTCGCCTTCGTAGATAACCACGTTGTCACGCAGAACGCgg < 1:639024/71‑1 (MQ=255) cGTCATCTTTGAAGCGGCGCAGGGACTCCAGCTCGCCTTCGTAGATAACCACGTTGTCACGCAGAACGCgg < 1:2687223/71‑1 (MQ=255) cGTCATCTTTGAAGCGGCGCAGGGACTCCAGCTCGCCTTCGTAGATAACCACGTTGTCACGCAGAACGCgg < 1:1938707/71‑1 (MQ=255) cGTCATCTTTGAAGCGGCGCAGGGACTCCAGCTCGCCTTCGTAGATAACCACGTTGTCACGCAGAACGCgg < 1:3512854/71‑1 (MQ=255) tCATCTTTGAAGCGGCGCAGGGACTCCAGCTCGCCTTCGTAGATAACCACGTTGTCACGCAGAACGCGGAt > 1:2844963/1‑71 (MQ=255) tCATCTTTGAAGCGGCGCAGGGACTCCAGCTCGCCTTCGTAGATAACCACGTTGTCACGCAGAACGCGGAt > 1:3196008/1‑71 (MQ=255) cATCTTTGAAGCGGCGCAGGGACTCCAGCTCGCCTTCGTAGATAACCACGt > 1:1123195/1‑51 (MQ=255) cATCTTTGAAGCGGCGCAGGGACTCCAGCTCGCCTTCGTAGATAACCACGTTGTCACGCAGAACGCGGATc > 1:235486/1‑71 (MQ=255) aTCTTTGAAGCGGCGCAGGGACTCCAGCTCGCCTTCGTAGATAACCACGTTGTCACGCAGAACGCGGATc < 1:857293/70‑1 (MQ=255) aTCTTTGAAGCGGCGCAGGGACTCCAGCTCGCCTTCGTAGATAACCACGTTGTCACGCAGAACGCGGATCg < 1:2344029/71‑1 (MQ=255) tCTTTGAAGCGGCGCAGGGACTCCAGCTCGCCTTCGTAGATAACCACGTTGTCACGCAGAACGCGGATCgg > 1:853926/1‑71 (MQ=255) tCTTTGAAGCGGCGCAGGGACTCCAGCTCGCCTTCGTAGATAACCACGTTGTCACGAAGAACGCGGATCgg > 1:3208267/1‑71 (MQ=255) cTTTGAAGCGGCGCAGGGACTCCAGCTCGCCTTCGTAGATAACCACGTTGTCACGCAGAACGCGGATCggg > 1:3499219/1‑71 (MQ=255) tttGAAGCGGCGCAGGGACTCCAGCTCGCCTTCGTAGATAACCACGTTGTCACGCAGAACGCGGATCGGGt > 1:4267978/1‑71 (MQ=255) tGAAGCGGCGCAGGGACTCCAGCTCGCCTTCGTAGATAACCACGt > 1:3096715/1‑45 (MQ=255) tGAAGCGGCGCAGGGACTCCAGCTCGCCTTCGTAGATAACCACGTTGTCACGCAGAACGCGGATCggg < 1:3891570/68‑1 (MQ=255) tGAAGCGGCGCAGGGACTCCAGCTCGCCTTCGTAGATAACCACGTTGTCACGCAGAACGCGGATCGGGtt < 1:4146979/70‑1 (MQ=255) tGAAGCGGCGCAGGGACTCCAGCTCGCCTTCGTAGATAACCACGTTGTCACGCAGAACGCGGATCGGGtt < 1:1569992/70‑1 (MQ=255) tGAAGCGGCGCAGGGACTCCAGCTCGCCTTCGTAGATAACCACGTTGTCACGCAGAACGCGGATCGGGt < 1:3879203/69‑1 (MQ=255) aaGCGGCGCAGGGACTCCAGCTCGCCTTCGTAGATAACCACGTTGTCACGCAGAACGCGGATCGGGTtgtg < 1:3061526/71‑1 (MQ=255) cggcgCAGGGACTCCAGCTCGCCTTCGTAGATAACCACGTTGTCACGCAGAACGCgg < 1:264840/57‑1 (MQ=255) cgcAGGGACTCCAGCTCGCCTTCGTAGATAACCACGTTGTCACGCAGAACGCGGATCGGGTTGTGACGttt < 1:3073278/71‑1 (MQ=255) cAGGGACTCCAGCTCGCCTTCGTAGATAACCACGTTGTCACGCAGAACGCGGATCGGGTTGTGAc < 1:2984724/65‑1 (MQ=255) aGGGACTCCAGCTCGCCTTCGTAGATAACCACGTTGTCACGCAGAACGCGGATCGGGTTGTGACGTTTAAc < 1:1063464/71‑1 (MQ=255) aGGGACTCCAGCTCGCCTTCGTAGATAACCACGTTGTCACGCAGAACGCGGATCGGGTTGTGACGTTTAAc < 1:2016069/71‑1 (MQ=255) gggACTCCAGCTCGCCTTCGTAGATAACCACGTTGTCACGCAGAACGCGGATCGGGTTGTGACGTTTaa < 1:357819/69‑1 (MQ=255) ggACTCCAGCTCGCCTTCGTAGATAACCACGTTGTCACGCAGAACGCGGATCGGGTTGTGACGt < 1:831569/64‑1 (MQ=255) gACTCCAGCTCGCCTTCGTAGATAACCACGTTGTCACGCAGAACGCGGATCGGGTTGTGACGTTTAACcac < 1:4068876/71‑1 (MQ=255) cTCCAGCTCGCCTTCGTAGATAACCACGTTGTCACGCAGAACGCGGATCGGGTtgt < 1:497992/56‑1 (MQ=255) ccAGCTCGCCTTCGTAGATAACCACGTTGTCACGCAGAACGCGGATCGGGTTGTGACGTTTAACCACACCt > 1:3442667/1‑71 (MQ=255) aaaccataacgttcagaccaacacCGTTGTCACGc < 1:2812009‑M2/11‑1 (MQ=255) aaaccataacgttcagaccaacacCGTTGTCACGCAg > 1:565480‑M2/25‑37 (MQ=255) cAGCTCGCCTTCGTAGATAACCACGTTGTCACGCAGaa > 1:940383/1‑38 (MQ=255) cAGCTCGCCTTCGTAGATAACCACGTTGTCACGCAGaa > 1:2895042/1‑38 (MQ=255) cAGCTCGCCTTCGTAGATAACCACGTTGTCACGCAGaa > 1:28361/1‑38 (MQ=255) cAGCTCGCCTTCGTAGATAACCACGTTGTCACGCAGAAcg > 1:2331104/1‑40 (MQ=255) cAGCTCGCCTTCGTAGATAACCACGTTGTCACGCAGAACGCGGATCGGGTTGTGACGTTTaa > 1:959114/1‑62 (MQ=255) cAGCTCGCCTTCGTAGATAACCACGTTGTCACGCAGAACGCGGATCGGGTTGTGACGTTTaa > 1:2655473/1‑62 (MQ=255) cAGCTCGCCTTCGTAGATAACCACGTTGTCACGCAGAACGCGGATCGGGTTGTGACGTTTAAc > 1:3068544/1‑63 (MQ=255) cAGCTCGCCTTCGTAGATAACCACGTTGTCACGCAGAACGCGGATCGGGTTGTGACGTTTAAc > 1:594576/1‑63 (MQ=255) cAGCTCGCCTTCGTAGATAACCACGTTGTCACGCAGAACGCGGATCGGGTTGTGACGTTTAACCACACCtt < 1:3557278/71‑1 (MQ=255) cAGCTCGCCTTCGTAGATAACCACGTTGTCACGCAGAACACGGATCGGGTTGTGACGTTTAACCACACCtt > 1:3773644/1‑71 (MQ=255) aaccataacgttcagaccaacacCGTTGTCACGCagg > 1:1182027‑M2/24‑36 (MQ=255) aaccataacgttcagaccaacacCGTTGTCACGCAg > 1:1014472‑M2/24‑36 (MQ=255) aaccataacgttcagaccaacacCGTTGTCACGCAg > 1:3363781‑M2/24‑36 (MQ=255) aGCTCGCCTTCGTAGATAACCACGTTGTCACGCAGAACGCGGATCGGGTTGTGACGTTTAACCACACCTTc < 1:3000059/71‑1 (MQ=255) cTCGCCTTCGTAGATAACCACGTTGTCACGCAGAACGCGGATCGGGTTGTGACGTTTAACCACACCTTCgg > 1:453022/1‑71 (MQ=255) cGCCTTCGTAGATAACCACGTTGTCACGCAGAACGCGGATCGGGTTGTGACGTTTAACCACACCTTCGGt > 1:4213394/1‑70 (MQ=255) gCCTTCGTAGATAACCACGTTGTCACGCAGAACGCGGATCGGGTTGTGACGTTTAACCACACCTTCGGTa < 1:1316361/70‑1 (MQ=255) ttCGTAGATAACCACGTTGTCACGCAGAACGCGGATCg < 1:173062/38‑1 (MQ=255) ttCGTAGATAACCACGTTGTCACGCAGAACGCGGATCg < 1:439531/38‑1 (MQ=255) ttCGTAGATAACCACGTTGTCACGCAGAACGCGGATCGGGTTGTGACGTTTAACcac > 1:4262627/1‑57 (MQ=255) tagTAGATAACCACGTTGTCACGCAGAACGCGGATCGGGTTGTGACGTTTAAc < 1:2256802/51‑1 (MQ=255) tCGTAGATAACCACGTTGTCACGGAGAACGCGGATCGGGTTGTGACGTTTAACCACACCTTCGGTAACCa > 1:1517298/1‑70 (MQ=255) cGTAGATAACCACGTTGTCACGCAGAACGCGGATCGGGTTGTGATGTTTAACCACACCTTCGGTAACCATa > 1:2942134/1‑71 (MQ=255) cGTAGATAACCACGTTGTCACGCAGAACGCGGATCGGGTTGTGACGTTTAACCACACCTTCGGTAACCATa > 1:931034/1‑71 (MQ=255) cGTAGATAACCACGTTGTCACGCAGAACGCGGATCGGGTTGTGACGTTTAACCACACCTTCGGTAACCATa > 1:1949034/1‑71 (MQ=255) ttAGATAACCACGTTGTCACGCAGAACGCGGATCGGGTTGTGAc < 1:132495/43‑1 (MQ=255) gTAGATAACCACGTTGTCACGCAGAACGCGGATCGGGTTGTGACGTTTAACCACACCTTCGGTAACCATa < 1:4389772/70‑1 (MQ=255) tAGATAACCACGTTGTCACGCAGAACGCGGATCGGGTTGTGAc < 1:632670/43‑1 (MQ=255) tAGATAACCACGTTGTCACGCAGAACGCGGATCGGGTTGTGAc < 1:3173115/43‑1 (MQ=255) aGATAACCACGTTGTCACGCAGAACGCGGATCGGGTTGTGACGTTTAACCACACCTTCGGTaa < 1:2170601/63‑1 (MQ=255) aGATAACCACGTTGTCACGCAGAACGCGGATCGGGTTGTGACGTTTAACCACACCTTCGGTAACCATACAg > 1:3029617/1‑71 (MQ=255) gATAACCACGTTGTCACGCAGAACGCGGATCGGGTTGTGACGTTTAAc < 1:2466555/48‑1 (MQ=255) gATAACCACGTTGTCACGCAGAACGCGGATCGGGTTGTGACGTTTAAc < 1:598113/48‑1 (MQ=255) gATAACCACGTTGTCACGCAGAACGCGGATCGGGTTGTGACGTTTAACCACACCTTCGGTAACCATACAGc < 1:4100635/71‑1 (MQ=255) gATAACCACGTTGTCACGCAGAACGCGGATCGGGTTGTGACGTTTAACCACACCTTCGGTAACCATACAGc > 1:461515/1‑71 (MQ=255) gATAACCACGTTGTCACGCAGAACGCGGATCGGGTTGTGACGTTTAACCACACCTTCGGTAACCATACAGc < 1:3750181/71‑1 (MQ=255) tAACCACGTTGTCACGCAGAACGCGGATCGGGTTGTGACGTTTAACca > 1:585615/1‑48 (MQ=255) aaCCACGTTGTCACGCAGAACGCGGATCGGGTTGTGACGTTTAACCACACCTTCGGTAACCATa > 1:244685/1‑64 (MQ=255) aaCCACGTTGTCACGCAGAACGCGGATCGGGTTGTGACGTTTAACCACACCTTCGGTAACCATACAGcc > 1:31691/1‑69 (MQ=255) aCCACGTTGTCACGCAGAACGCGGATCGGGTTGTGACGTTTAACCACACCTTCGGTAACCa < 1:2013076/61‑1 (MQ=255) aCCACGTTGTCACGCAGAACGCGGATCGGGTTGTGACGTTTAACCACACCTTCGGTAACCATACAGCCTg < 1:96126/70‑1 (MQ=255) aCCACGTTGTCACGCAGAACGCGGATCGGGTTGTGACGTTTAACCACACCTTCGGTAACCATACAGCCTg < 1:1665242/70‑1 (MQ=255) aCCACGTTGTCACGCAGAACGCGGATCGGGTTGTGACGTTTAACCACACCTTCGGTAACCATACAGCCTGc < 1:3968355/71‑1 (MQ=255) aCCACGTTGTCACGCAGAACGCGGATCGGGTTGTGACGTTTAACCACACCTTCGGTAACCATACAGCCTGc < 1:1628387/71‑1 (MQ=255) aCCAAGTTGTCACGCAGAACGCGGATCGGGTTGTGACGTTTAACCACACCTTCGGTAACCa < 1:3986508/61‑1 (MQ=255) aCGTTGTCACGCAGAACGCGGATCGGGTTGTGACGTTTAACCACACCTTCGGTAACCATACAGc > 1:2337799/1‑64 (MQ=255) cGTTGTCACGCAGAACGCGGATCGGGTTGTGACGTTTa > 1:1035802/1‑38 (MQ=255) cGTTGTCACGCAGAACGCGGATCGGGTTGTGACGTTTAACCacac > 1:4029887/1‑45 (MQ=255) cGTTGTCACGCAGAACGCGGATCGGGTTGTGACGTTTAACCacac > 1:3037566/1‑45 (MQ=255) cGTTGTCACGCAGAACGCGGATCGGGTTGTGACGTTTAACCACACCTTCGGTAACCATACAGCCTGCGATg > 1:369382/1‑71 (MQ=255) | CCGTTACGGACTTCGTTAACGTCATCTTTGAAGCGGCGCAGGGACTCCAGCTCGCCTTCGTAGATAACCACGTTGTCACGCAGAACGCGGATCGGGTTGTGACGTTTAACCACACCTTCGGTAACCATACAGCCTGCGATG > W3110S.gb/3313297‑3313437 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |