| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 49701 | 24 (0.490) | 3 (0.080) | 3/80 | NT | 12.0% | intergenic (+70/‑122) | kefC/folA | potassium:proton antiporter/dihydrofolate reductase |
| ? | W3110S.gb | = 49712 | 25 (0.640) | intergenic (+81/‑111) | kefC/folA | potassium:proton antiporter/dihydrofolate reductase | |||||
ATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/49625‑49701‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgagtccaCGCTCTCTCCCTGGACTCGCCGCATTACAATGAAACAAAAACAAACAGTTAGCTGTAAAGTGTGATTTAC < W3110S.gb/49712‑49643 ATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGC < 1:2685812/70‑1 AAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGA > 1:2857682/1‑64 TCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCACGCTCTCTCCCTGGA < 1:1752330/69‑1 TTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCACGCTCTCTCCCTGGA > 1:1199145/1‑63 TACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGA > 1:3349872/1‑41 ACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGT < 1:494536/35‑1 TTTCATTGTAATGCGGCGAGTCCACGCTCTCTCCC < 1:51319/35‑1 GGCGAGTCCACGCTCTCTCCCTGGACTCGCCGCATTACAATGAAACAAAAACAAAC < 1:433243/56‑1 GCGAGTCCACGCTCTCTCCCTGGACTCGCCGCATTACAATGAAACAAAAACAAACAGTTAGCTGTAAAGTG > 1:931626/1‑71 AGTCCACGCTCTCTCCCTGGACTCGCCGCATTACAATGAAACAAAAACAAA < 1:1002846/51‑1 TCCACGCTCTCTCCCTGGACTCGCCGCATTACAATGAAACAAAAACAAACAGTTAGCTGTAAAGTG < 1:4085170/66‑1 CACGCTCTCTCCCTGGACTCGCCGCATTACAATGAAACAAAAACAAACAGTTAGCTGTAAAGTGTGATTTA > 1:1781309/1‑71 CACGCTCTCTCCCTGGACTCGCCGCATTACAATGAAACAAAAACAAACAGTTAGCTGTAAAGTGTGATTTA > 1:3659177/1‑71 CACGCTCTCTCCCTGGACTCGCCGCATTACAATGAAACAAAAACAAACAGATAGCTGTAAAGag > 1:2900377/1‑62 ACGCTCTCTCCCTGGACTCGCCGCATTACAATGAAACAAAAACAAACAGTTAGCTGTAAAGTGTGATTTAC < 1:2542206/71‑1 ACGCTCTCTCCCTGGACTCGCCGCATTACAATGAAACAAAAACAAACAGTTAGCTGTA < 1:1671537/58‑1 ATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/49625‑49701‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgagtccaCGCTCTCTCCCTGGACTCGCCGCATTACAATGAAACAAAAACAAACAGTTAGCTGTAAAGTGTGATTTAC < W3110S.gb/49712‑49643 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |