| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 152663 | 96 (1.970) | 3 (0.070) | 3/90 | NT | 3.2% | coding (150/570 nt) | yadM | predicted fimbrial‑like adhesin protein |
| ? | W3110S.gb | = 152688 | 93 (2.120) | coding (125/570 nt) | yadM | predicted fimbrial‑like adhesin protein | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TTCTGTCGTTTTATTCGCGATCTTATCCAGACCCATCTTAGGGATTCTCAATGTGTAGTTATTATTGCCATCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/152591‑152663‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catcaCACTTACTGGTAATAACGTCACGAATGATGGCAATAATAACTACACATTGAGAATCCCTAAGATGGGTCT < W3110S.gb/152688‑152619 TTCTGTCGTTTTATTCGCGATCTTATCCAGACCCATCTTAGGGATTCTCAATGTGTAGTTATTATTGCCAT > 1:1545515/1‑71 TCTGTCGTTTTATTCGCGATCTTATCCAGACCCATCTTAGGGATTCTCAATGTGTAGTTATTATTGCCAT > 1:3900413/1‑70 CTGTCGTTTTATTCGCGATCTTATCCAGACCCATCTTAGGGATTCTCAATGTGTAGTTATTATTGCCATCA > 1:2307374/1‑71 CTGTCGTTTTATTCGCGATCTTATCCAGACCCATCTTAGGGATTCTCAATGTGTAGTTATTATTGCCATCA > 1:1502983/1‑71 CTGTCGTTTTATTCGCGATCTTATCCAGACCCATCTTAGGGATTCTCAATGTGTAGTTATTATTGCCATC < 1:211006/70‑1 CTGTCGTTTTATTCGCGATCTTATCCAGACCCATCTTAGGGATTCTCAATGTGTAGTTATTATTGCCATC < 1:2923869/70‑1 CTGTCGTTTTATTCGCGATCTTATCCAGACCCATCTTAGGGATTATCAATGTGTAGTTATTATTGCCATCA > 1:970464/1‑71 GACCCATCTTAGGGATTCTCAATGTGTAGTTATTATTGCCATCACACTTACTGGTAATAACGTCACGAATG < 1:1196003/71‑1 TCAATGTGTAGTTATTATTGCCATCACACTTACTGGTAATAACGTCACGAAT < 1:3062351/52‑1 AATGTGTAGTTATTATTGCCATCACACTTACTGGTAATAACGTCACGAATGA > 1:1408925/1‑52 ATCACACTTACTGGTAATAACGTCACGAATGATGGCAATAATAACTACACATTGAGAATCCCTAAGATGGG > 1:3216077/1‑71 ATCACACTTACTGGTAATAACGTCACGAATGATGGCAATAATAACTACACATTGAGAATCCCTAAGATG > 1:1636596/1‑69 ATCACACTTACTGGTAATAACGTCACGAATGATGGCAATAATAACTACACATTGA < 1:3866782/55‑1 ATCACACTTACTGGTAATAACGTCACGAATGATGGCAATA > 1:2802618/1‑40 TCACACTTACTGGTAATAACGTCACGAATGATGGCAATAATAACTACACATTGAGAATCCCTAAGATGGG < 1:1615772/70‑1 CACACTTACTGGTAATAACGTCACGAATGATGGCAATAATAACTACACATTGAGAATCCCTAAGATGGGTC > 1:11551/1‑71 ACACTTACTGGTAATAACGTCACGAATGATGGCAATAATAACTACACATTGAGAATCCCTAAGATGGGTCT < 1:2300913/71‑1 ACACTTACTGGTAATAACGTCACGAATGATGGCAATAATAACTACACATTGAGAATCC > 1:2719130/1‑58 ACACTTACTGGTAATAACGTCACGAATGATGGCAATAATAACTACACATTGAGAA > 1:991947/1‑55 ACACTTACTGGTAATAACGTCACGAATGATGGCAATAATAACTACACATTGAGAA > 1:3005219/1‑55 ACACTTACTGGTAATAACGTCACGAATGATGGCAATAATAACTACACATTGAGAA > 1:2714712/1‑55 TTCTGTCGTTTTATTCGCGATCTTATCCAGACCCATCTTAGGGATTCTCAATGTGTAGTTATTATTGCCATCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/152591‑152663‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catcaCACTTACTGGTAATAACGTCACGAATGATGGCAATAATAACTACACATTGAGAATCCCTAAGATGGGTCT < W3110S.gb/152688‑152619 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |