New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? W3110S.gb 381043 =NA (NA)3 (0.070) 3/86 NT NA coding (146/906 nt) insD IS2 insertion element transposase InsAB'
?W3110S.gb 381065 = NA (NA)coding (168/906 nt) insD IS2 insertion element transposase InsAB'

Only 100 of 133 total aligned reads displayed.

CAGCGCCCATACCCGACGATAACCATACGTTGGCAGCTCTCCGATAACATGGTGTATACGGAGAAGCACATCCGTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  W3110S.gb/381119‑381043
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tccgtatACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGGGCGCTGCTTCGCAGACAGGCA  >  W3110S.gb/381065‑381134
                                                                                                                                                   
CAGCGCCCATACCCGACGATAACCATACGTTGGCAGCTCTCCGATAACATGGTGTATACGGAGAAGCACAT                                                                              <  1:3669885/71‑1
 AGCGCCCATACCCGACGATAACCATACGTTGGCAGCTCTCCGATAACATGGTGTATACGGAGAAGCACATC                                                                             <  1:1061182/71‑1
  GCGCCCATACCCGACGATAACCATACGTTGGCAGCTCTCCGATAACATGGTGTATACGGAGAAGCACATCC                                                                            >  1:701704/1‑71
  GCGCCCATACCCGACGATAACCATACGTTGGCAGCTCTCCGATAACATGGTGTATACGGAGAAGCACATCC                                                                            >  1:3699479/1‑71
  GCGCCCATACCCGACGATAACCATACGTTGGCAGCTCTCCGATAACATGGTGTATACGGAGAAGCACATCC                                                                            >  1:356593/1‑71
  GCGCCCATACCCGACGATAACCATACGTTGGCAGCTATCCGATAACATGGTGTATACGGAGAAGCACATCC                                                                            >  1:4362044/1‑71
    GCCCATACCCGACGATAACCATACGTTGGCAGCTCTCCGATAACATGGTGTATACGGAGAAGCACATCCGT                                                                          <  1:1154729/71‑1
    GCCCATACCCGACGATAACCATACGTTGGCAGCTCTCCGATAACATGGTGTATACGGAGAAGCACATCCGT                                                                          <  1:2810759/71‑1
    GCCCATACCCGACGATAACCATACGTTGGCAGCTCTCCGATAACATGGTGTATACGGAGAAGCACATCCG                                                                           >  1:1980801/1‑70
    GCCCATACCCGACGATAACCATACGTTGGCAGCTCTCCGATAACATGGTGTATACGGAGAAGCACATCCG                                                                           >  1:618146/1‑70
    GCCCATACCCGACGATAACCATACGTTGGCAGCTCTCCGATAACATGGTGTATACGGAGAAGCACATCCG                                                                           >  1:2764147/1‑70
    GCCCATACCCGACGATAACCATACGTTGGCAGCTCTCCGATAACATGGTGTATACGGAGAAGCACATCCG                                                                           >  1:348544/1‑70
     CCCATACCCGACGATAACCATACGTTGGCAGCTCTCCGATAACATGGTGTATACGGAGAAGCACATCCGTA                                                                         <  1:2044527/71‑1
     CCCATACCCGACGATAACCATACGTTGGCAGCTCTCCGATAACATGGTGTATACGGAGAAGCACATCCGTA                                                                         <  1:2260332/71‑1
     CCCATACCCGACGATAACCATACGTTGGCAGCTCTCCGATAACATGGTGTATACGGAGAAGCACATCCGT                                                                          <  1:4000061/70‑1
     CCCATACCCGACGATAACCATACGTTGGCAGCTCTCCGATAACATGGTGTATACGGAGAAGCACATCCGT                                                                          <  1:2900288/70‑1
      CCATACCCGACGATAACCATACGTTGGCAGCTCTCCGATAACATGGTGTATACGGAGAAGCACATCCGTAT                                                                        <  1:4306744/71‑1
      CCATACCCGACGATAACCATACGTTGGCAGCTCTCCGATAACATGGTGTATACGGAGAAGCACATCCGTA                                                                         <  1:3341807/70‑1
      CCATACCCGACGATAACCATACGTTGGCAGCTCTCCGATAACATGGTGTATACGGAGAAGCACATCCGT                                                                          <  1:1174225/69‑1
       CATACCCGACGATAACCATACGTTGGCAGCTCTCCGATAACATGGTGTATACGGAGAAGCACATCCGTAT                                                                        >  1:3142413/1‑70
       CATACCCGACGATAACCATACGTTGGCAGCTCTCCGATAACATGGTGTATACGGAGAAGCACATCCGTAT                                                                        >  1:1376946/1‑70
       CATACCCGACGATAACCATACGTTGGCAGCTCTCCGATAACATGGTGTATACGGAGAAGCACATCCGTAT                                                                        >  1:924263/1‑70
       CATACCCGACGATAACCATACGTTGGCAGCTCTCCGATAACATGGTGTATACGGAGAAGCACATCCGT                                                                          <  1:830909/68‑1
        ATACCCGACGATAACCATACGTTGGCAGCTCTCCGATAACATGGTGTATACGGAGAAGCACATCCGTAT                                                                        >  1:1048100/1‑69
        ATACCCGACGATAACCATACGTTGGCAGCTCTCCGATAACATGGTGTATACGGAGAAGCACATCCGTAT                                                                        >  1:4486439/1‑69
         TACCCGACGATAACCATACGTTGGCAGCTCTCCGATAACATGGTGTATACGGAGAAGCACATCCGTAT                                                                        <  1:1116611/68‑1
          ACCCGACGATAACCATACGTTGGCAGCTCTCCGATAACATGGTGTATACGGAGAAGCACAT                                                                              >  1:1803605/1‑61
           CCCGACGATAACCATACGTTGGCAGCTCTCCGATAACATGGTGTATACGGAGAAGCACATCCG                                                                           >  1:1130608/1‑63
            CCGACGATAACCATACGTTGGCAGCTCTCCGATAACATGGTGTATACGGAGAAGCACATCCGT                                                                          <  1:181997/63‑1
            CCGACGATAACCATACGTTGGCAGCTCTCCGATAACATGGTGTATACGGAGAAGCACATC                                                                             <  1:1764109/60‑1
                CGATAACCATACGTTGGCAGCTCTCCGATAACATGGTGTATACGGAGAAGCACATCCGTAT                                                                        >  1:2365031/1‑61
                          ACGTTGGCAGCTCTCCGATAACATGGTGTATACGGAGAAGCACATCCG                                                                           >  1:4147618/1‑48
                          ACGTTGGCAGCTCTCCGATAACATGGTGTATACGGAGAAGCACATC                                                                             >  1:1752553/1‑46
                              TGGCAGCTCTCCGATAACATGGTGTATACGGAGAAGAACATCCGT                                                                          >  1:1828157/1‑45
                                    CTCTCCGATAACATGGTGTATACGGAGAAGCACATCCGTAT                                                                        <  1:1010303/41‑1
                                                      TATACGGAGAAGCACATCCGTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGG                             >  1:4188040/1‑66
                                                        TACGGAGAAGCACATCCGTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGG                             >  1:3452538/1‑64
                                                                      TCCGTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGGGCGCTGCTTCGCAGA        >  1:24090/1‑71
                                                                      TCCGTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGGGCGC                   >  1:909754/1‑60
                                                                      TCCGTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGGGC                     >  1:2317699/1‑58
                                                                      TCCGTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGGGC                     <  1:4107532/58‑1
                                                                      TCCGTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTAT                                   >  1:3639107/1‑44
                                                                      TCCGTATACACCATGTTATCGGAGAGCTGCCAACGT                                           <  1:3237048/36‑1
                                                                       CCGTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGGGCGCTGCTTCGCAGA        >  1:3000402/1‑70
                                                                       CCGTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTAACGTCGGGTATGGGCGCTGCTTCGCAGA        >  1:2754983/1‑70
                                                                        CGTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGTGTATGGGCGCTGCTTCGCAGAC       <  1:1986291/70‑1
                                                                        CGTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGGGCGCTGCTTCGCAGAC       <  1:4239880/70‑1
                                                                        CGTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGGGCGCTGCTTCGCAGAC       <  1:1864826/70‑1
                                                                        CGTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGGGCGCTGCTTCGCAGAC       <  1:1338367/70‑1
                                                                        CGTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGGGCGCTGCTTCGCAGAC       <  1:4398363/70‑1
                                                                        CGTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGGGCGCTGCTTCGCAGAC       <  1:3526098/70‑1
                                                                        CGTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGGGCGCTGCTTCGCAGAC       <  1:3058119/70‑1
                                                                        CGTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGGGCGCTGCTTCGCAGA        <  1:2482490/69‑1
                                                                        CGTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGGGCGCTGCTTCGCAGA        <  1:1766797/69‑1
                                                                        CGTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGGGCGCTGCTTCGCAGA        <  1:3448215/69‑1
                                                                        CGTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGGGCGCTGCTTCGCAGA        <  1:2636406/69‑1
                                                                        CGTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGGGCGCTGCTTCGCAGA        <  1:3552374/69‑1
                                                                        CGTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGGGCGCTGCTTCGCAGA        >  1:4024492/1‑69
                                                                        CGTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGGGCGCTGCTTCGCAGA        <  1:3799460/69‑1
                                                                        CGTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGGGCGCTGCTTCGCAG         <  1:2020285/68‑1
                                                                        CGTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGGGCGCTGCTTCGCAG         <  1:3320633/68‑1
                                                                        CGTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGGGCGCTGCTTCGCAG         <  1:3126433/68‑1
                                                                        CGTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGGGCGCTGCTTCGCAG         <  1:1490533/68‑1
                                                                        CGTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGGGCGCTGCT               <  1:3199032/62‑1
                                                                        CGTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGGGCGC                   <  1:4576345/58‑1
                                                                        CGTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGG                       <  1:4572108/54‑1
                                                                        CGTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGG                       >  1:260509/1‑54
                                                                        CGTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGT                                >  1:3563389/1‑45
                                                                         GTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGGGCGCTGCTTCGCAGACAG     <  1:2948879/71‑1
                                                                         GTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGGGCGCTGCTTCGCA          <  1:3832951/66‑1
                                                                         GTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGGGCGCTGCTTCGCA          <  1:1411370/66‑1
                                                                         GTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGGGCGCTGCTTCGCA          <  1:351496/66‑1
                                                                          TATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGGGCGCTGCTTCGCAGACAGG    >  1:2094515/1‑71
                                                                          TATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGGGCGCTGCTTCGCAGACAGG    >  1:1455141/1‑71
                                                                          TATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGGGCGCTGCTTCGCAGACAGG    <  1:83273/71‑1
                                                                          TATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGGGCGCTGCTTCGCAGA        >  1:1099537/1‑67
                                                                          TATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGGGCGCTGCTTCGCAG         <  1:976187/66‑1
                                                                          TATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGGGCGCTGCT               <  1:4226820/60‑1
                                                                          TATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGGGCGC                   >  1:4042823/1‑56
                                                                          TATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTA                          >  1:4525335/1‑49
                                                                          TATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTA                          <  1:4480001/49‑1
                                                                          TATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTA                          <  1:4475952/49‑1
                                                                          TATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGT                                <  1:1081713/43‑1
                                                                          TATACACCATGTTATCGGAGAGCTGCCAACGTATGGTT                                     <  1:3858839/38‑1
                                                                          TATACACCATGTTATCGGAGAGCTGCCAACGTATGGT                                      >  1:623072/1‑37
                                                                          TATACACCATGTTATCGGAGAGCTGCCAACGTATGGATATCGTCGGGTATGGGCGCTGCTTCGCAGACAGG    >  1:3220069/1‑71
                                                                           ATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTA                          >  1:2081171/1‑48
                                                                           ATACACCATGTTATCGGAGAGCTGCCAACGTATGG                                       >  1:2439664/1‑35
                                                                            TACACCATGTTATCGGAGAGCTGCCAACGTATTGTTATCGTCGGGTATGGGCGCTGCTTCGCAGAAAGG    >  1:2440807/1‑69
                                                                            TACACCATGTTATCGGAGAGCTGCCAACGTATGTTTATCGTCGGGTATGGGCGCTGCTTCGCAGACAGGC   <  1:2951112/70‑1
                                                                            TACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGGGCGCTGCTTCGCAGACAcg    >  1:1581002/1‑67
                                                                            TACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGGGCGCTGCTTCGCAGACAGGCA  <  1:418332/71‑1
                                                                            TACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGGGCGCTGCTTCGCAGACAG     >  1:1246844/1‑68
                                                                            TACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGGGCGCTGCTTCGCA          >  1:185472/1‑63
                                                                            TACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGGGCGCTGCTT              <  1:3329359/59‑1
                                                                            TACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGGGCGCTG                 >  1:3685589/1‑56
                                                                            TACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATG                        >  1:3084279/1‑49
                                                                            TACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTA                          >  1:794052/1‑47
                                                                            TACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTA                          >  1:3278356/1‑47
                                                                            TACACAATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGG                             >  1:1850399/1‑44
                                                                                                                                                   
CAGCGCCCATACCCGACGATAACCATACGTTGGCAGCTCTCCGATAACATGGTGTATACGGAGAAGCACATCCGTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  W3110S.gb/381119‑381043
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tccgtatACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGGGCGCTGCTTCGCAGACAGGCA  >  W3110S.gb/381065‑381134

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.