| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 389660 = | 109 (2.240) | 4 (0.090) | 3/92 | NT | 3.9% | coding (186/1461 nt) | yaiT | hypothetical protein |
| ? | W3110S.gb | 389686 = | 96 (2.140) | coding (212/1461 nt) | yaiT | hypothetical protein | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TCGTGCCGTTAACGGTATCGCCGTTAAAGGACTGATCGAAATCACCATTGGTGTTGTTGTAATAGACAAAACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/389733‑389660‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accaATGGTGATTTCGATCAGTCCTTTAACGGCGATACCGTTAACGGCACGATCTCAACCTATTATTTGAACC > W3110S.gb/389686‑389754 TCGTGCCGTTAACGGTATCGCCGTTAAAGGACTGATCGAAATCACCATTGGTGTTGTTGTAATAGACAAAA > 1:885925/1‑71 CGTGCCGTTAACGGTATCGCCGTTAAAGGACTGATCGAAATCACCATTGGTGTTGTTGTAATAGACAAAAC > 1:1578343/1‑71 CGTGCCGTTAACGGTATCGCCGTTAAAGGACTGATCGAAATCACCATTGGTGTTGTTGTAATAGACAAAAC > 1:2396248/1‑71 CGTGCCGTTAACGGTATCGCCGTTAAAGGACTGATCGAAATCACCATTGGTGTTGTTGTAATAGACAAAA > 1:115562/1‑70 AACGGTATCGCCGTTAAAGGACTGATCGAAATCACCATTGGTGTTGTTGTAATAGACAAAA > 1:1707029/1‑61 ACGGTATCGCCGTTAAAGGACTGATCGAAATCACCATTGGTGTTGTTGTAATAGACAAAA > 1:4422258/1‑60 TCGCCGTTAAAGGACTGATCGAAATCACCATTGGTGTTGTTGTAATAGACAAAAC < 1:3402742/55‑1 AAAGGACTGATCGAAATCACCATTGGTGTTGTTGTAATAGACAAAAC > 1:801231/1‑47 GATCGAAATCACCATTGGTGTTGTTGTAATAGACAAAACC < 1:3345470/40‑1 ATCGAAATCACCATTGGTGTTGTTGTAATAGACAAAA > 1:704199/1‑37 CGAAATCACCATTGGTGTTGTTGTAATAGACAAAA > 1:4108329/1‑35 TGGTGTTGTTGTAATAGACAAAACCAATGGTGATTTCGATCAGTCCTTTAACGGCGATACCGTTAACGGCA > 1:1116539/1‑71 GGTGTTGTTGTAATAGACAAAACCAATGGTGATTTCGATCAGTCCTTTAACGGCGATACCGTTAACGGCAC > 1:2192561/1‑71 GGTGTTGTTGTAATAGACAAAACCAATGGTGATTTCGATCAGTCCTTTAACGGCGATACCGTTAACGGCAC > 1:2640352/1‑71 GTGTTGTTGTAATAGACAAAACCAATGGTGATTTCGATCAGTCCTTTAACGGCGATACCGTTAACGGCAC < 1:3982619/70‑1 ACCAATGGTGATTTCGATCAGTCCTTTAACGGCGATACCGTTAACGGCACGATCTCAACCTATTATTTGAA > 1:911589/1‑71 ACCAATGGTGATTTCGATCAGTCCTTTAACGGCGATACCGTTAACGGCACGATCTCAACCTATTATTTGA < 1:3752469/70‑1 ACCAATGGTGATTTCGATCAGTCCTTTAACGGCGATACCGTTAACGGCACGATCTCAACCTATTATTTGA < 1:1310500/70‑1 CCAATGGTGATTTCGATCAGTCCTTTAACGGCGATACCGTTAACGGCACGATCTCAACCTATTATTTGAAC > 1:3574019/1‑71 CCAATGGTGATTTCGATCAGTCCTTTAACGGCGATACCGTTAACGGCACGATCTCAACCTATTATTTGAAC < 1:1664978/71‑1 CAATGGTGATTTCGATCAGTCCTTTAACGGCGATACCGTTAACGGCACGATCTCAACCTATTATTTGAACC < 1:3378019/71‑1 CAATGGTGATTTCGATCAGTCCTTTAACGGCGATACCGTTAACGGCACGATCTCAACCTATTATTTGAAC > 1:543070/1‑70 CAATGGTGATTTCGATCAGTCCTTTAACGGCGATACCGTTAACGGCACG < 1:1344246/49‑1 AATGGTGATTTCGATCAGTCCTTTAACGGCGATACCGTTAA > 1:1003833/1‑41 TCGTGCCGTTAACGGTATCGCCGTTAAAGGACTGATCGAAATCACCATTGGTGTTGTTGTAATAGACAAAACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/389733‑389660‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accaATGGTGATTTCGATCAGTCCTTTAACGGCGATACCGTTAACGGCACGATCTCAACCTATTATTTGAACC > W3110S.gb/389686‑389754 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |