| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 713546 | 346 (7.100) | 3 (0.070) | 3/86 | NT | 0.92% | coding (138/546 nt) | seqA | regulatory protein for replication initiation |
| ? | W3110S.gb | = 713562 | 348 (8.310) | coding (154/546 nt) | seqA | regulatory protein for replication initiation | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 104 total aligned reads displayed.
TCGGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/713470‑713546‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgacgCAACGCGAACCTCTTTCGTCACCGGAGCAGCAGGCTGTGATGCGGCGGAAAATTTCAACATACGCCGTAA < W3110S.gb/713562‑713493 TCGGCGAGAGCGCATCCGACATTTTACGGCGTATTTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCG > 1:3846724/1‑71TCGGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCG > 1:397478/1‑71TCGGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCG > 1:334625/1‑71TCGGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCG > 1:3354089/1‑71TCGGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCG > 1:2571840/1‑71TCGGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCG > 1:735541/1‑71TCGGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCG > 1:186278/1‑71TCGGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCG > 1:2382961/1‑71TCGGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCG > 1:3752890/1‑71TCGGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCG > 1:4009643/1‑71TCGGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCG > 1:1205229/1‑71TCGGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCG > 1:2300444/1‑71TCGGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCG > 1:4119808/1‑71TCGGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCG > 1:597978/1‑71TCGGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCG > 1:590144/1‑71TCGGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCG > 1:1077466/1‑71TCGGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCG > 1:891449/1‑71TCGGCGAGAGCGCATCCGACATTTTACGGCGTATGTT‑AAATTTTCCGCCGCATCACAGCCTGCTGCTCCG < 1:3618949/70‑1 CGGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGG > 1:2446632/1‑71 GGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGT > 1:2503623/1‑71 GGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGT > 1:3643921/1‑71 GGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGT > 1:4037865/1‑71 GGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGT > 1:772210/1‑71 GGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGT > 1:204059/1‑71 GCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTG < 1:3389460/71‑1 GCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTG < 1:3161631/71‑1 GCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTG < 1:118103/71‑1 GCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGT < 1:3734016/70‑1 GCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGT < 1:2401510/70‑1 CGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGA > 1:2088625/1‑71 AGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGAC > 1:4540175/1‑70 AGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGA < 1:358919/69‑1 GAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACG < 1:4529078/70‑1 TCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCAAAGCCTGCTGCTCCGGT < 1:1179304/59‑1 CGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGA > 1:3917505/1‑59 GACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGT < 1:1456987/56‑1 ATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGCAACGCGAAC < 1:3947433/67‑1 TTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACG < 1:4561600/56‑1 TTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCG < 1:251029/50‑1 TTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCG > 1:1414868/1‑48 TATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGT < 1:3627014/42‑1 TATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCG < 1:4557518/40‑1 TGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGCAACGCGAACCTCTT > 1:2844673/1‑59 TGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGA > 1:1893726/1‑42 TGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGA > 1:4568413/1‑42 TTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACG > 1:782174/1‑42 TTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGA > 1:433423/1‑40 TTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCG > 1:1554155/1‑36 TGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGG > 1:1702149/1‑36 TGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGG > 1:1980377/1‑36 TTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGAC > 1:3014337/1‑35 ACAGCCTGCTGCTCCGGTGACGCAACGCGAACCTCTTTCG > 1:474321/1‑40 GGTGACGCAACGCGAACCTCTTTCGTCACCGGAGCAGCAGGCTGTGATGa < 1:818021/50‑2 GGTGACGCAACGCGAACCTCTTTCGTCACCGGAGCAGCAGGCTGTGATGCGGCGGAAAATTTCAACATACG > 1:3434656/1‑71 GGTGACGCAACGCGAACCTCTTTCGTCACCGGAGCAGCAGGCTGTGATGCGGCGGAAAATTTCAACATACG < 1:474799/71‑1 GGTGACGCAACGCGAACCTCTTTCGTCACCGGAGCAGCAGGCTGTGATGCGGCGGAAAATTTCAA < 1:3593799/65‑1 GGTGACGCAACGCGAACCTCTTTCGTCACCGGAGCAGCAGGCTGTGATGCGGCGGAAAATTTC > 1:1130964/1‑63 GTGACGCAACGCGAACCTCTTTCGTCACCGGAGCAGCAGGCTGTGATGCGGCGGAAAATTTCAACATAatc > 1:1800750/1‑68 GTGACGCAACGCGAACCTCTTTCGTCACCGGAGCAGCAGGCTGTGATGCGGCGGAAAATTTCAACATACGC > 1:1848527/1‑71 GTGACGCAACGCGAACCTCTTTCGTCACCGGAGCAGCAGGCTGTGATGCGGCGGAAAATTTCAACATACGC > 1:1638793/1‑71 GTGACGCAACGCGAACCTCTTTCGTCACCGGAGCAGCAGGCTGTGATGCGGCGGAAAATTTCAACATACGC < 1:2552537/71‑1 GTGACGCAACGCGAACCTCTTTCGTCACCGGAGCAGCAGGCTGTGATGCGGCGGAAAATTTCAACATACGC > 1:816883/1‑71 GTGACGCAACGCGAACCTCTTTCGTCACCGGAGCAGCAGGCTGTGATGCGGCGGAAAAT < 1:1468325/59‑1 GTGACGCAACGCGAACCTCTTTCGTCACCGGAGCAGCAGGCTGTGATGCGGC < 1:4571234/52‑1 GTGACGCAACGCGAACCTCTTTCGTCACCGGAGCAGC > 1:4504898/1‑37 TGACGCAACGCGAACCTCTTTCGTCACCGGAGCAGCAGGCTGTGATGCGGCGGAAAATTTCAACATACGCC > 1:2741657/1‑71 TGACGCAACGCGAACCTCTTTCGTCACCGGAGCAGCAGGCTGTGATGCGGCGGAAAATTTCAACATACGCC < 1:3992145/71‑1 TGACGCAACGCGAACCTCTTTCGTCACCGGAGCAGCAGGCTGT < 1:229368/43‑1 GACGCAACGCGAACCTCTTTCGTCACCGGAGCAGCAGGCTGTGATGCGGCGGAAAATTTCAACATACGCCG > 1:1217092/1‑71 GACGCAACGCGAACCTCTTTCGTCACCGGAGCAGCAGGCTGTGATGCGGCGGAAAATTTCAACATACGCCG > 1:1148527/1‑71 GACGCAACGCGAACCTCTTTCGTCACCGGAGCAGCAGGCTGTGATGCGGCGGAAAATTTCAACATACGCCG > 1:1547871/1‑71 GACGCAACGCGAACCTCTTTCGTCACCGGAGCAGCAGGCTGTGATGCGGCGGAAAATTTCAACATACGCCG > 1:3434611/1‑71 GACGCAACGCGAACCTCTTTCGTCACCGGAGCAGCAGGCTGTGATGCGGCGGAAAATTTCAACATACGCCG > 1:3190615/1‑71 GACGCAACGCGAACCTCTTTCGTCACCGGAGCAGCAGGCTGTGATGCGGCGGAAAATTTCAACATA > 1:1830425/1‑66 GACGCAACGCGAACCTCTTTCGTCACCGGAGCAGCAGGCTGTGATGCGGCGGAAAATTTCAACATA > 1:3014815/1‑66 GACGCAACGCGAACCTCTTTCGTCACCGGAGCAGCAG > 1:3876191/1‑37 ACGCAACGCGAACCTCTTTCGTCACCGGAGCAGCAGGCTGTGATGCGGCGGAAAATTTCAACATACGCCGT < 1:334155/71‑1 ACGCAACGCGAACCTCTTTCGTCACCGGAGCAGCAGGCTGTGATGCGGCGGAAAATTTCAACATACGCCG > 1:2338066/1‑70 ACGCAACGCGAACCTCTTTCGTCACCGGAGCAGCAGGCTGTGATGCGGCGGAAAATTTCAACATACGCCG > 1:3895888/1‑70 ACGCAACGCGAACCTCTTTCGTCACCGGAGCAGCAGGCTGTGATGCGGCGGAAAATTTCAACATACGCCG > 1:584050/1‑70 ACGCAACGCGAACCTCTTTCGTCACCGGAGCAGCAGGCT > 1:4135717/1‑39 ACGCAACGCGAACCTCTTTCGTCACCGGAGCAGCAGGCT > 1:4130296/1‑39 CGCAACGCGAACCTCTTTCGTCACCGGAGCAGCAGGCTGTGATGCGGCGGAAAATTTCAACATACGCCGT > 1:4357533/1‑70 CGCAACGCGAACCTCTTTCGTCACCGGAGCAGCAGGCTGTGATGCGGCGGAAAATTTCAACATACGCCGT > 1:70072/1‑70 CGCAACGCGAACCTCTTTCGTCACCGGAGCAGCAGGCTGTGATGCGGCGGAAAATTTCAACATACGCCGT > 1:376235/1‑70 CGCAACGCGAACCTCTTTCGTCACCGGAGCAGCAGGCTGTGATGCGGCGGAAAATTTCAACATACGCCGT > 1:149085/1‑70 CGCAACGCGAACCTCTTTCGTCACCGGAGCAGCAGGCTGTGATGCGGCGGAAAATTTCAA > 1:3166571/1‑60 CGCAACGCGAACCTCTTTCGTCACCGGAGCAGCAGGCTGTGA > 1:743505/1‑42 GCAACGCGAACCTCTTTCGTCACCGGAGCAGCAGGCTGTGATGCGGCGGAAAATTTCAACATACGCCGTAA < 1:907795/71‑1 GCAACGCGAACCTCTTTCGTCACCGGAGCAGCAGGCTGTGATGCGGCGGAAAATTTCAACATACGCCGTAA < 1:486362/71‑1 GCAACGCGAACCTCTTTCGTCACCGGAGCAGCAGGCTGTGATGCGGCGGAAAATTTCAACATACGCCGTAA < 1:4578358/71‑1 GCAACGCGAACCTCTTTCGTCACCGGAGCAGCAGGCTGTGATGCGGCGGAAAATTTCAACATACGCCGTAA < 1:3911106/71‑1 GCAACGCGAACCTCTTTCGTCACCGGAGCAGCAGGCTGTGATGCGGCGGAAAATTTCAACATACGCCGTAA < 1:343504/71‑1 GCAACGCGAACCTCTTTCGTCACCGGAGCAGCAGGCTGTGATGCGGCGGAAAATTTCAACATACGCCGTAA < 1:1788741/71‑1 GCAACGCGAACCTCTTTCGTCACCGGAGCAGCAGGCTGTGATGCGGCGGAAAATTTCAACATACGCCGTAA < 1:1067370/71‑1 GCAACGCGAACCTCTTTCGTCACCGGAGCAGCAGGCTGTGATGCGGCGGAAAATTTCAACA < 1:1062355/61‑1 GCAACGCGAACCTCTTTCGTCACCGGAGCAGCAGGCTGTGATGCGGCGGAAAATTTCAAC > 1:2175513/1‑60 GCAACGCGAACCTCTTTCGTCACCGGAGCAGCAGGCTGTGATGCGGCGGAAAATTT < 1:2139733/56‑1 GCAACGCGAACCTCTTTCGTCACCGGAGCAGCAGGCTGT < 1:3009801/39‑1 GCAACGCGAACCTCTTTCGTCACCGGAGCAGCAGCCTGTGA > 1:1990608/1‑41 TCGGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/713470‑713546‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgacgCAACGCGAACCTCTTTCGTCACCGGAGCAGCAGGCTGTGATGCGGCGGAAAATTTCAACATACGCCGTAA < W3110S.gb/713562‑713493 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |