| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 1884125 = | 76 (1.560) | 3 (0.070) | 3/92 | NT | 4.6% | coding (500/1086 nt) | yeaU | predicted dehydrogenase |
| ? | W3110S.gb | 1884153 = | 54 (1.210) | coding (528/1086 nt) | yeaU | predicted dehydrogenase | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TTAGTGGCAGAAGTTAGTGTCTTACGTGGACGGCTTTGCGCAAGTTCGAAGGCATAACGCAAAATGCGATCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/1884197‑1884125‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgaACTTGCGCAAAGCCGTCCACGTAAGACACTAACTTCTGCCACTAAATCGAACGGTTTAGCCATCAGCAT > W3110S.gb/1884153‑1884221 TTAGTGGCAGAAGTTAGTGTCTTACGTGGACGGCTTTGCGCAAGTTCGAAGGCATAACGCAAAATGCGAT > 1:1084764/1‑70 tatTGGCAGAAGTTAGTGTCTTACGTGGACGGCTTTGCGCAAGTTCGAAGGCATAACGCAAAATGCGATC < 1:4178067/67‑1 TAGTGGCAGAAGTTAGTGTCTTACGTGGACGGCTTTGCGCAAGTTCGAAGGCATAACGCAAAATGCGATC > 1:547846/1‑70 GTGGCAGAAGTTAGTGTCTTACGTGGACGGCTTTGCGCAAGTTCGAAGGCATAACGCAAAATGCGATCGA > 1:1224644/1‑70 GTGGCAGAAGTTAGTGTCTTACGTGGACGGCTTTGCGCAAGTTCGAAGGCATAACGCAAAATGCGATCGA > 1:911537/1‑70 CGAAGGCATAACGCAAAATGCGATCGAACTTGCGCAAAGCCGTCCACGTAAGACACTAACTTCTGCCACT > 1:3876276/1‑70 AGGCATAACGCAAAATGCGATCGAACTTGCGCAAAGCCGTCCACGTAA > 1:2163621/1‑48 GGCATAACGCAAAATGCGATCGAACTTGCGCAAAGCCGTCCACGTAAGACACTAACTTCTGCCACTAAAT > 1:4026045/1‑70 TCGAACTTGCGCAAAGCCGTCCACGTAAGACACTAACTTCTGCCACTAAATCGAACGGTTTAGCCATCAG > 1:1308485/1‑70 CGAACTTGCGCAAAGCCGTCCACGTAAGACACTAACTTCTGCCACTAAATCGAACGGTTTAGCCATCAGCA > 1:1488709/1‑71 CGAACTTGCGCAAAGCCGTCCACGTAAGACACTAACTTCTGCCACTAAATCGAACGGTTTAGCCATCAGCA > 1:2315691/1‑71 CGAACTTGCGCAAAGCCGTCCACGTAAGACACTAACTTCTGCCACTAAATCGAACGGTTTAGCCATCAGCA > 1:2440156/1‑71 CGAACTTGCGCAAAGCCGTCCACGTAAGACACTAACTTCTGCCACTAAATCGAACGGTTTAGCCATCAGCA > 1:251269/1‑71 CGAACTTGCGCAAAGCCGTCCACGTAAGACACTAACTTCTGCCACTAAATCGAACGGTTTAGCCATCAGCA > 1:2682807/1‑71 CGAACTTGCGCAAAGCCGTCCACGTAAGACACTAACTTCTGCCACTAAATCGAACGGTTTAGCCATCAGCA > 1:450905/1‑71 GAACTTGCGCAAAGCCGTCCACGTAAGACACTAACTTCTGCCACTAAATCGAACGGTTTAGCCATCAGCAT < 1:4279748/71‑1 TTAGTGGCAGAAGTTAGTGTCTTACGTGGACGGCTTTGCGCAAGTTCGAAGGCATAACGCAAAATGCGATCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/1884197‑1884125‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgaACTTGCGCAAAGCCGTCCACGTAAGACACTAACTTCTGCCACTAAATCGAACGGTTTAGCCATCAGCAT > W3110S.gb/1884153‑1884221 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |