| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 3078146 = | 75 (1.540) | 5 (0.110) | 5/92 | NT | 6.9% | intergenic (‑160/+154) | cmtB/tktA | predicted mannitol‑specific enzyme IIA component of PTS/transketolase 1, thiamin‑binding |
| ? | W3110S.gb | 3078170 = | 65 (1.450) | intergenic (‑184/+130) | cmtB/tktA | predicted mannitol‑specific enzyme IIA component of PTS/transketolase 1, thiamin‑binding | |||||
GGCGTGTTGTAGATCACAAATATTTATATGCAATAAATATCAATTATGTAATATGCATCACGATATGCGTATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/3078218‑3078146‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tattACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCA > W3110S.gb/3078170‑3078238 GGCGTGTTGTAGATCACAAATATTTATATGCAATAAATATCAATTATGTAATATGCATCACGATATGCGTA > 1:700214/1‑71 GCGTGTTGTAGATCACAAATATTTATATGCAATAAATATCAATTATGTAATATGCATCACGATATGCGTAT < 1:1284868/71‑1 GCGTGTTGTAGATCACAAATATTTATATGCAATAAATATCAATTATGTAATATGCATCACGATATGCGTAT < 1:1290190/71‑1 GCGTGTTGTAGATCACAAATATTTATATGCAATAAATATCAATTATGTAATATGCATCACGATATGCGTAT > 1:4291388/1‑71 GTAGATCACAAATATTTATATGCAATAAATATCAATTATGTAATATGCATCACGATATGCGTATT > 1:2143227/1‑65 GTAGATCACAAATATTTATATGCAATAAATATCAATTATGTAATATGCATCACGATATGCGTA > 1:435371/1‑63 CAAATATTTATATGCAATAAATATCAATTATGTAATATGCATCACGATATGCGTATTACATAATTGATATT < 1:2603219/71‑1 TATTTATATGCAATAAATATCAATTATGTAATATGCATCACGATATGCGTA > 1:4247479/1‑51 TATATGCAATAAATATCAATTATGTAATATGCATCACGATATGCGTATT < 1:1015920/49‑1 TATGCAATAAATATCAATTATGTAATATGCATCACGATATGCGTATT < 1:1050615/47‑1 AATAAATATCAATTATGTAATATGCATCACGATATGCGTA > 1:2846870/1‑40 AATAAATATCAATTATGTAATATGCATCACGATATGCGTA > 1:3229368/1‑40 AATAAATATCAATTATGTAATATGCATCACGATATGCGTA > 1:2634665/1‑40 TGTAATATGCATCACGATATGCGTATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAA > 1:2071426/1‑70 AATATGCATCACGATATGCGTATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTAC < 1:2379610/65‑1 ATATGCATCACGATATGCGTATTACATAATTGATATTTATTGCATATAAATATTTGT > 1:442055/1‑57 TATGCATCACGATATGCGTATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAA > 1:3688777/1‑65 TATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATC < 1:3312872/58‑1 TATTACATAATTGATATTTATTGCATATAAATATTTGTG < 1:735439/39‑1 TATTACATAATTGATATTTATTGCATATAAATATTTGTG < 1:1796741/39‑1 TATTACATAATTGATATTTATTGCATATAAATATTTGTG < 1:603633/39‑1 TATTACATAATTGATATTTATTGCATATAAATATTTGT < 1:1321416/38‑1 TATTACATAATTGATATTTATTGCATATAAATATT < 1:297458/35‑1 TTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCA < 1:1588288/71‑1 TTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCA < 1:1426096/71‑1 TTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGC > 1:1707805/1‑70 TTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCC > 1:4319830/1‑51 TTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACG > 1:3280592/1‑49 TTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAA > 1:2406492/1‑45 TTACATAATTGATATTTATTGCATATAAATATTTG < 1:1555246/35‑1 TACATAATTGATATTTATTGCATATGAATATTTGTGATCTACAACACGCCTTATCTATTG > 1:4129744/1‑60 TACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGT > 1:51189/1‑65 TACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGT > 1:3753059/1‑65 TACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGT > 1:3343664/1‑65 TACATAATTGATATTTATTGCATATAAATATTTGTG < 1:2025744/36‑1 GGCGTGTTGTAGATCACAAATATTTATATGCAATAAATATCAATTATGTAATATGCATCACGATATGCGTATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/3078218‑3078146‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tattACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCA > W3110S.gb/3078170‑3078238 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |