| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| MC JC | W3110S.gb | 3,746,913 | Δ1,199 bp | 100% | [tnaB]–[tnaB] | [tnaB], insH, [tnaB] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | W3110S.gb | 3746913–3748109 | 3748111 | 3–1199 | 85 [0] | [0] 87 | [tnaB]–[tnaB] | [tnaB],insH,[tnaB] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 3746912 | 0 (0.000) | 71 (1.580) | 42/92 | NT | 100% | coding (71/447 nt) | tnaB | tryptophan transporter of low affinity |
| ? | W3110S.gb | 3748112 = | 0 (0.000) | coding (871/984 nt) | tnaB | tryptophan transporter of low affinity | |||||
CTTAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/3746839‑3746912‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAAT > W3110S.gb/3748112‑3748180 CTTAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGT > 1:1275427/1‑71 AAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTA < 1:1519408/70‑1 AAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGT > 1:1507800/1‑68 CCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACAC > 1:1928026/1‑70 CGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACC < 1:494976/70‑1 CGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACC < 1:2910101/70‑1 CCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGC < 1:4077765/71‑1 CCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAG < 1:724532/62‑1 CCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAG < 1:75527/62‑1 CCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTA < 1:3377577/59‑1 CCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTA < 1:1796618/59‑1 CAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTTGCAACAGCTAAGTTAGAGAACACCAGC < 1:2494279/70‑1 CAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAG > 1:2760565/1‑69 AGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAG > 1:975056/1‑71 AGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAG > 1:3495359/1‑71 GATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACAC > 1:2096787/1‑64 ATAATAGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGA < 1:2061289/57‑1 ATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAA < 1:2486287/70‑1 TCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAA > 1:4026266/1‑71 TCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAA > 1:2159862/1‑71 AACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACAC < 1:1892790/56‑1 ACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCG < 1:930500/71‑1 acCCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGAT < 1:918848/69‑1 AACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGAT < 1:3872154/71‑1 AACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTT < 1:1915245/44‑1 ACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGAT < 1:246988/70‑1 CCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAA > 1:3457764/1‑48 CCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGT > 1:4482514/1‑39 CAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCA > 1:1911497/1‑53 CAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAG > 1:3564293/1‑43 AGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCC < 1:1154775/71‑1 GCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAA > 1:3932245/1‑58 GCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAA > 1:3687171/1‑58 CGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGT < 1:3337289/71‑1 CGTGACACCAAAGAACGAACTGGCAACAGCTAAGT < 1:872045/35‑1 CGTGACACCAAAGAACGAACTGGCAACAGCTAAGT < 1:866767/35‑1 TGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATG < 1:3796681/65‑1 ACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTG > 1:4311920/1‑71 ACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAA > 1:3007722/1‑38 ACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTT < 1:1271914/71‑1 CCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTT < 1:1916834/71‑1 CCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTT < 1:1231914/70‑1 CCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAA < 1:1334019/35‑1 CAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTG > 1:1149222/1‑71 CAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTG > 1:4094387/1‑71 CAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGC < 1:3476534/60‑1 CAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACA > 1:1050727/1‑36 AAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGG > 1:458218/1‑71 AAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGG > 1:463689/1‑71 AAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAG > 1:4360756/1‑42 AAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCA > 1:1355635/1‑38 AAAGAACGAACTGGCAACAGCTAAGTTAGAGAACA > 1:4100684/1‑35 AAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGT < 1:3730044/71‑1 AAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCA < 1:1761920/40‑1 AAGAACGAACTGGAAACAGCTAAGTTAGAGAACAC > 1:2311488/1‑35 AGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTG > 1:3203482/1‑71 AGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGG > 1:1688948/1‑69 AGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCC‑TGCTGTTTGGTGC > 1:704037/1‑71 AGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAA > 1:3413083/1‑46 GAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGC < 1:1801317/71‑1 GAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGG > 1:2396037/1‑68 GAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAAAGCCGTGCTGTTTGGTGC > 1:2000999/1‑71 GAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAA < 1:1658504/43‑1 ACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCC < 1:4207087/70‑1 ACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTC < 1:1677946/46‑1 CGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAAC > 1:1370664/1‑43 ACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGG > 1:2289137/1‑70 CTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAA > 1:4246985/1‑71 TGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGAT < 1:1655811/43‑1 GCAACAGCTAAGTTAGAGAACACCAGCAGGGAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGA > 1:1871370/1‑71 GCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGA > 1:2657826/1‑71 GCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGA > 1:663298/1‑71 GCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAAC < 1:2636775/69‑1 GCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGC > 1:2751683/1‑61 AACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATT > 1:3832976/1‑71 AACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAG < 1:506464/63‑1 ACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTT < 1:925873/71‑1 ACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCGGTTTGGTGCCGAGGAACGATTT < 1:363901/71‑1 CAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTT > 1:1339056/1‑70 CAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTT > 1:2276198/1‑70 CAGCTAAGTTAGAGAACACCAGCAGGCAAAACTAGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTT > 1:4144926/1‑70 AGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCA > 1:3296097/1‑71 AGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAA > 1:3096897/1‑38 AGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAA > 1:599892/1‑38 AGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATA > 1:1535444/1‑37 GCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTC < 1:3111603/69‑1 GCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCC > 1:3224009/1‑41 CTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCC < 1:4432779/40‑1 AGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGC > 1:974479/1‑71 AGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATT < 1:1112892/63‑1 GTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGC < 1:2375113/40‑1 TAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAA > 1:4340923/1‑71 TAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCA > 1:4257398/1‑66 AGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAAT > 1:258538/1‑71 CTTAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/3746839‑3746912‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAAT > W3110S.gb/3748112‑3748180 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |