| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| MC JC | W3110S.gb | 3,750,593 | Δ1,199 bp | 100% | insH | insH | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | W3110S.gb | 3750593–3751791 | 3751791 | 1–1199 | 95 [0] | [0] 97 | insH | insH |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 3750592 | 0 (0.000) | 73 (1.630) | 41/92 | NT | 100% | intergenic (‑104/‑69) | tnaA/insH | tryptophanase/L‑cysteine desulfhydrase, PLP‑dependent/IS5 element protein |
| ? | W3110S.gb | 3751792 = | 0 (0.000) | intergenic (+151/+116) | insH/tnaC | IS5 element protein/tryptophanase leader peptide | |||||
ATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/3750521‑3750592‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctaaAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAATAGATCAC > W3110S.gb/3751792‑3751860 ATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACT > 1:3173155/1‑70 CCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAA > 1:195509/1‑71 CCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAA < 1:1350796/70‑1 CTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAAC < 1:1705547/71‑1 TGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACT < 1:1363463/65‑1 TGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTtgt < 1:1802649/66‑4 TGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAA < 1:3310088/70‑1 TGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACT < 1:128093/63‑1 AATATTACATCTGCTATACCGATTAATTCGCGAGATATATATGCAAGCACCATCATTTACTAAAACAAGT > 1:1246301/1‑70 AATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTA < 1:1415076/71‑1 AATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGT > 1:3129739/1‑70 TATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAA < 1:256892/71‑1 TATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAA < 1:4500397/66‑1 TTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAAT > 1:1893998/1‑70 TTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAAT > 1:2500274/1‑70 TTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAAT > 1:2540531/1‑70 CATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAAC < 1:1437617/71‑1 CATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAAC < 1:1386580/71‑1 TCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAA < 1:1703483/64‑1 TCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAA < 1:227894/64‑1 CTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAG < 1:1774292/70‑1 CTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGA < 1:1318696/69‑1 TACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGA < 1:1828383/71‑1 TACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATG < 1:992841/70‑1 TACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGAT < 1:1293577/69‑1 TACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGA < 1:37876/64‑1 TACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAAC < 1:2654800/50‑1 CGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCT < 1:4455137/71‑1 GATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTT > 1:3847403/1‑71 ATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTT > 1:2264878/1‑71 ATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTT > 1:745403/1‑71 TTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTG > 1:2277326/1‑71 TAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTG > 1:4058915/1‑70 TAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTG > 1:1478031/1‑70 TAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTG > 1:1708186/1‑70 TAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTG > 1:2274988/1‑70 TAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTG > 1:58315/1‑70 TAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAA > 1:1414191/1‑50 TAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTA < 1:2979151/48‑1 AATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGC > 1:255501/1‑70 AATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGC < 1:3160374/70‑1 ATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAA < 1:1279450/71‑1 ATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAA < 1:4000317/71‑1 TTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAA < 1:3177572/71‑1 TTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAA < 1:2040429/71‑1 CGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAA < 1:1058142/68‑1 CGCCAGATATATATGCAAGCACCATCATTTACTAAAACAA > 1:2346752/1‑40 CGCCAGATATATATGCAAGCACCATCATTTACTAAAACA > 1:4193982/1‑39 CGCCAGATATATATGCAAGCACCATCATTTACTAAAACA > 1:3198036/1‑39 GCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAG < 1:121869/70‑1 CAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCA < 1:1978625/71‑1 GATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATG < 1:1684518/53‑1 TATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAAT < 1:1110342/71‑1 ATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAAT > 1:1554942/1‑70 ATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAAT > 1:1777314/1‑70 ATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACATTTGCAAAAGGCAAAAT > 1:2145814/1‑70 ATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACATTTGCAAAAGGCAAAAT > 1:2140554/1‑70 ATATATGCAAGCACCATCATTTACTAAAACAAGTAAA > 1:1153282/1‑37 TATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTA < 1:1216/71‑1 TATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATT > 1:1705742/1‑70 TATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATT > 1:2732070/1‑70 ATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTA < 1:1531453/70‑1 ATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGAC > 1:1283817/1‑50 TATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAG < 1:788878/71‑1 TATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAG < 1:3949820/71‑1 TATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAG < 1:1530981/71‑1 TATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTT > 1:4446481/1‑53 TATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGA > 1:2752331/1‑43 ATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAG > 1:2980759/1‑70 TGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGA > 1:4413933/1‑70 TGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGA < 1:1050122/41‑1 CAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATA < 1:3750437/70‑1 AGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAA < 1:2768603/51‑1 GCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAA < 1:1015216/51‑1 GCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCT > 1:2212007/1‑44 GCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGAC < 1:1592555/42‑1 CACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAA > 1:1926942/1‑62 ACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAA > 1:552732/1‑61 ACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAA > 1:547362/1‑61 CATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAA > 1:824225/1‑70 ATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACA < 1:1138545/71‑1 ATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAG < 1:195941/65‑1 ATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGA < 1:2232464/60‑1 TCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACA > 1:1065834/1‑70 TCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAA < 1:2935223/45‑1 TCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAA < 1:3484452/44‑1 ATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAA > 1:4110659/1‑66 ATTTACTAAAACAAGTAAATAAACGAGAGATGACC > 1:955003/1‑35 TACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAA > 1:2326453/1‑67 TACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAA < 1:2590089/52‑1 CTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAATAGATC < 1:1177510/71‑1 CTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAA < 1:4056469/65‑1 TAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAATAGATCA > 1:4300400/1‑71 TAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAATAGA < 1:1939256/68‑1 TAAAACAAGTAAATAAACGAGAGATGACCTTTGCA < 1:1122497/35‑1 AAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAATAGATCA > 1:3223321/1‑70 AAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAG > 1:2266511/1‑49 AAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAA > 1:4593455/1‑58 AAACAAGTAAATAAACGAGAGATGACCTTTG‑AAAAGGCAAAATTAAGATATAGCAAACAAATAGATCAC < 1:359937/69‑1 ATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/3750521‑3750592‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctaaAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAATAGATCAC > W3110S.gb/3751792‑3751860 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |