| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| MC JC | W3110S.gb | 3,750,593 | Δ1,199 bp | 100% | insH | insH | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | W3110S.gb | 3750593–3751791 | 3751791 | 1–1199 | 126 [0] | [0] 124 | insH | insH |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 3750592 | 0 (0.000) | 93 (2.040) | 39/90 | NT | 100% | intergenic (‑104/‑69) | tnaA/insH | tryptophanase/L‑cysteine desulfhydrase, PLP‑dependent/IS5 element protein |
| ? | W3110S.gb | 3751792 = | 0 (0.000) | intergenic (+151/+116) | insH/tnaC | IS5 element protein/tryptophanase leader peptide | |||||
Only 100 of 127 total aligned reads displayed.
TGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/3750519‑3750592‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctaaAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAATAGATCACA > W3110S.gb/3751792‑3751861 TGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTAC > 1:332160/1‑71 CTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAAC < 1:2480143/71‑1 TGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAAC > 1:1434479/1‑70 ATATTACATCTGCTATACCGATTAATTCGCCACATATATATGCAAGCACCATCATTTACTAAAACAAGTAA < 1:2774221/71‑1 TATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAA > 1:2545259/1‑70 TTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATA < 1:50303/71‑1 TTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATA < 1:3970316/71‑1 CATCTGCTATACCTATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAAC > 1:746994/1‑71 CATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTA < 1:1343654/64‑1 ATCTGCTATACCGATTAATTCGCCAGATATTTATGCAAGCACCATCATTTACTAAAACA < 1:1916203/59‑1 CTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAAC > 1:1948533/1‑68 CTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAAC > 1:964984/1‑68 TGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGT < 1:410618/59‑1 CTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGA < 1:2362514/69‑1 CTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGA < 1:2692330/67‑1 CTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGA < 1:566007/67‑1 CTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGA < 1:3249633/67‑1 ATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGAT > 1:1244161/1‑70 TACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGT < 1:3464900/54‑1 TACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGT < 1:1826547/54‑1 TACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAA < 1:2764876/47‑1 TACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAA < 1:4236093/47‑1 CCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACC > 1:3084708/1‑71 CCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACC > 1:267328/1‑71 CCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACC > 1:4686263/1‑71 CGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCT < 1:4532945/71‑1 TAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTG > 1:2738824/1‑70 AATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGAC < 1:3951337/64‑1 TTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAA < 1:1066654/71‑1 TTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAA < 1:886400/71‑1 ccCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGA > 1:2271935/3‑59 CGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAG > 1:1083356/1‑71 CGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAG > 1:2700663/1‑71 GCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAG < 1:4803559/70‑1 CAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGCTGACCTTTGCAAA < 1:915696/66‑1 CAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGG > 1:3463598/1‑69 CAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATA < 1:4521872/44‑1 CAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAAT > 1:1540044/1‑43 AGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAA < 1:418365/71‑1 AGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAA < 1:2097528/71‑1 GATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAA < 1:106073/71‑1 ATATATGCAAGCACCATCATTTACTAAAACAAGTAA > 1:1392991/1‑36 ATATATGCAAGCACCATCATTTACTAAAACAAGTAA > 1:3239053/1‑36 ATATATGCAAGCACCATCATTTACTAAAAAAAGTAAATAA > 1:3868791/1‑40 TATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATT < 1:3963727/70‑1 TATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATT < 1:2967725/70‑1 TATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATT < 1:2697593/70‑1 TATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATT < 1:422107/70‑1 TATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAA < 1:2106881/66‑1 TATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAA < 1:2316686/66‑1 TATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGA > 1:1652914/1‑45 TATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAG < 1:1673991/71‑1 TATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATT > 1:1027184/1‑68 TATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATT > 1:2474739/1‑68 TATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAAT > 1:155993/1‑67 TATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGA > 1:4118376/1‑45 ATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAG < 1:4027673/70‑1 ATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATT > 1:1243459/1‑67 ATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAAT > 1:1944087/1‑66 TGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGAT < 1:3360240/71‑1 TGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGA < 1:2462478/70‑1 TGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGA < 1:306453/70‑1 TGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAA < 1:4659613/56‑1 TGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCA < 1:3897254/54‑1 TGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGACGACCTTTGCAAAAGGCAAAATTAAGA < 1:3988520/70‑1 CAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATA < 1:2373699/70‑1 AAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAA < 1:192689/59‑1 AGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAA < 1:2572843/51‑1 AGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAA < 1:784199/51‑1 GCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCT < 1:327796/44‑1 CACCATCATATACAAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGA > 1:695565/1‑64 ACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCA > 1:838642/1‑70 ACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGA < 1:3484659/63‑1 ACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGA < 1:2534120/63‑1 ATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACA < 1:3324107/71‑1 ATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACA < 1:4384318/71‑1 ATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACA < 1:2958383/71‑1 ATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAAC > 1:782783/1‑70 ATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAAC > 1:2378807/1‑70 TCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACA > 1:4393909/1‑70 TCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACA > 1:2859071/1‑70 ATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAA > 1:2271168/1‑70 ATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAA > 1:3503726/1‑70 ATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAAAAAA < 1:2947646/70‑1 TTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAA > 1:3331956/1‑69 TTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAA > 1:3915900/1‑69 TACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAAC < 1:2605133/64‑1 TACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAA < 1:4274321/46‑1 ACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAA > 1:342187/1‑66 CTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAA > 1:3491586/1‑46 CTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAA < 1:1609724/37‑1 TAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACA < 1:405982/62‑1 TAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACA < 1:371377/62‑1 TAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAA < 1:501560/43‑1 AAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAATAGATCACA > 1:544533/1‑71 AAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAATAGATCACA > 1:4616866/1‑71 AAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAATAGATCACA > 1:460693/1‑71 AAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAATAGATCA < 1:3077194/69‑1 AAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAAT > 1:2853440/1‑63 AAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAA > 1:732064/1‑43 TGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/3750519‑3750592‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctaaAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAATAGATCACA > W3110S.gb/3751792‑3751861 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |