New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? W3110S.gb = 220041146 (1.690)5 (0.230)
+AGCCACTTCC
3/78 NT 13.2% pseudogene (604/825 nt)
pseudogene (604/3796 nt)
molR
molR
DNA‑binding transcriptional regulator, N‑ter fragment; ECK2108:JW2102:b2115
DNA‑binding transcriptional regulator; ECK2108:JW2102+JW5915+JW5916:b4499
?W3110S.gb 2615024 = 37 (1.360)coding (275/1464 nt) yfgC predicted peptidase

TTACCATCACCAGTAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  W3110S.gb/2200396‑2200411
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CACCGTTTCATTTTT  >  W3110S.gb/2615024‑2615038
                ||||||||||               
TTACCATCACCAGTAAAGCCACTTCCCACCGTTTCATTTTT  <  1:573621/41‑1
TTACCATCACCAGTAAAGCCACTTCCCACCGTTTCATTT    >  1:428461/1‑39
  ACCATCACCAGTAAAGCCACTTCCCACCGTTTCATTTT   >  1:2076097/1‑38
  ACCATCACCAGTAAAGCCACTTCCCACCGTTTCATTTT   >  1:2507140/1‑38
      TCACCAGTAAAGCCACTTCCCACCGTTTCATTTTT  <  1:2482258/35‑1
                ||||||||||               
TTACCATCACCAGTAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  W3110S.gb/2200396‑2200411
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CACCGTTTCATTTTT  >  W3110S.gb/2615024‑2615038

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.