| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 713380 = | 29 (1.040) | 25 (0.970) | 13/92 | NT | 45.2% | intergenic (‑156/‑29) | ybfF/seqA | conserved hypothetical protein/regulatory protein for replication initiation |
| ? | W3110S.gb | = 4125340 | 34 (1.320) | coding (836/837 nt) | dam | DNA adenine methylase | |||||
CGTAAAAAGGTGGACGAACTGCTGGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAATTCTCAAGGAGAAGCGGATGAAACAGTATTTGATTGCCCCCTCAATTCTGTCGGCTGATTTTGCCC > W3110S.gb/4125276‑4125407 | cGTAAAAAGGTGGACGAACTGCTGGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAattcag < 1:1052421‑M2/71‑7 (MQ=255)cGTAAAAAGGTGGACGAACTGCTGGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAattcag < 1:1545003‑M2/71‑7 (MQ=255) aaaaGGTGGACGAACTGCTGGCTTTGTACAAACCTGGAGTCGTTTCACCCGCGAAAAAATAattcagcta > 1:2080746‑M2/1‑61 (MQ=255) aaaaGGTGGACGAACTGCTGGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAATTCTCAAg < 1:601896/70‑1 (MQ=255) aGGTGGACGAACTGCTGGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAattcacctaagac > 1:389998‑M2/1‑58 (MQ=255) tGGACGAACTGCTGGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAattcagctaa > 1:865206‑M2/1‑55 (MQ=255) tGGACGAACTGCTGGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAattcagctaa > 1:726792‑M2/1‑55 (MQ=255) tGGACGAACTGCTGGCTTTGTACAAACCAGGAGGCGTTTCACCCGCGAAAAAATAattcagctaa > 1:420216‑M2/1‑55 (MQ=255) cGAACTGCTGGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAattcagctaagaca < 1:60862‑M2/65‑15 (MQ=255) aaCTGCTGGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAattcagctaagacactgcactg > 1:281897‑M2/1‑49 (MQ=255) aaCTGCTGGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAattcagctaagacactgcactg < 1:1355372‑M2/71‑23 (MQ=255) aaCTGCTGGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAattcagctaagacactgcactg < 1:1955831‑M2/71‑23 (MQ=255) ctgctgGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAattcagctaagacactgcactgga > 1:159600‑M2/1‑47 (MQ=255) ctgctgGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAattcagctaagacactgcactgga > 1:706424‑M2/1‑47 (MQ=255) tgctgGCTTTGTACAAACCATGAGTCGTTTCACCCGCGAAAAAATAattcagctaagac > 1:1527277‑M2/1‑46 (MQ=255) tgctgGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAattcagctaagac > 1:1702667‑M2/1‑46 (MQ=255) tgctgGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAattcagctaagac > 1:1279114‑M2/1‑46 (MQ=255) gctgGCTTTGTACAAACCAGGAGTCGTTTCCCCCGCGAAAAAATAATTCTCAAGGAGAAGCGGATGaaa > 1:2345824/1‑69 (MQ=255) ctgGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAattcagctaagacac < 1:2475941‑M2/59‑16 (MQ=255) ctgGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAATTCTCAAGGAGAAGCGGATGAAACAg > 1:1443152/1‑71 (MQ=255) ctgGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAATTCTCAAGGAGAAGCGGATGAAACAg > 1:825704/1‑71 (MQ=255) ctgGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAATTCTCAAGGAGAAGCGGATGAAACAg > 1:989018/1‑71 (MQ=255) ggCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAATTCTCAAGGAGAAGCGGATGAAACAGTa > 1:2285038/1‑71 (MQ=255) ttGTACAAACCAGGAGTCGTTTCACCCGAGAAAAAATAa > 1:565304‑M2/1‑38 (MQ=255) tGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAATTCTCAAGGAGAAGCGGATGAAACAGTATTTg < 1:39057/70‑1 (MQ=255) aaaCCAGGAGTCGTTTCACCCGCGAAAAAATAATTCTCAAGGAGAAGCGGATGa < 1:2647448/54‑1 (MQ=255) aaaCCAGGAGTCGTTTCACCCGCGAAAAAATAATTCTCAAGGAGAAGCGGATGa < 1:2299806/54‑1 (MQ=255) aaaCCAGGAGTCGTTTCACCCGCGAAAAAATAATTCTCAAGGAGAAGCGGATGa < 1:2302867/54‑1 (MQ=255) aaCCAGGAGGCGTTTCACCCGCGAAAAAATAATTCTCAAGga < 1:1132747/42‑1 (MQ=255) cAGGAGTCGTTTCACCCGCGAAAAAATAATTCTCAAGGAGAAGCGGATGAAACAGTATTTg < 1:1219262/61‑1 (MQ=255) cAGGAGTCGTTTCACCCGCGAAAAAATAATTCTCAAGGAGAAGCGGATGAAACAGTATTTg < 1:1490028/61‑1 (MQ=255) cAGGAGTCGTTTCACCCGCGAAAAAATAATTCTCAAGGAGAAGCGGATGAAACAGTATTTg < 1:710982/61‑1 (MQ=255) gTCGTTTCACCCGCGAAAAAATAATTCTCAAGGAGAAGCGGATGAAACAGTATTTGAt > 1:2608343/1‑58 (MQ=255) tCGTTTCACCCGCGAAAAAATAattcagctaagacactgcactggattaagatgaaaacgattgaagtt > 1:573400‑M2/1‑22 (MQ=255) tCGTTTCACCCGCGAAAAAATAattcagctaagacactgcactggattaa > 1:285047‑M2/1‑22 (MQ=255) tCGTTTCACCCGCGAAAAAATAATTCTCAAGGAGAAGCGGATGAAACAGTATTTGATTGCCCCCTCAATTc > 1:2553518/1‑71 (MQ=255) gTTTCACCCGCGAAAAAATAattcagctaagacactgcactggattaagatgaaaacgattgaagttga < 1:1465106‑M2/69‑50 (MQ=255) gTTTCACCCGCGAAAAAATAattcagctaagacactgcactggattaagatgaaaacgattgaagttga < 1:2504289‑M2/69‑50 (MQ=255) gTTTCACCCGCGAAAAAATAATTCTCAAGGAGAAg > 1:2143975/1‑35 (MQ=255) gTTTCACCCGCGAAAAAATAATTCTCAAGGAGAAGCGGATGAAACAGTATTTGATTGCCCCCTCAATTCTg > 1:1225456/1‑71 (MQ=255) tCACCCGCGAAAAAATAattcagctaagacactgcactggattaagatgaaaacgattgaagttgatgat < 1:947624‑M2/70‑54 (MQ=255) tCACCCGCGAAAAAATAattcagctaagacactgcactggattaagatgaaaacgattgaagttgatgat < 1:576976‑M2/70‑54 (MQ=255) tCACCCGCGAAAAAATAattcagctaagacactgcactggattaagatgaaaacgattgaagttgatga < 1:2665098‑M2/69‑53 (MQ=255) cACCCGCGAAAAAATAattcagctaagacactgcactggattaagatgaaaacgattgaagttgatgatg > 1:2104775‑M2/1‑16 (MQ=255) cACCCGCGAAAAAATAATTCTCAAGGAGAAGCGGATGAAACAGTATTTGa > 1:2108272/1‑50 (MQ=255) cACCCGCGAAAAAATAATTCTCAAGGAGAAGCGGATGAAACAGTATTTGa > 1:703298/1‑50 (MQ=255) agccgcGAAAAAATAattcagctaagacactgcactggattaa > 1:2396839‑M2/3‑15 (MQ=255) cccGCGAAAAAATAATTCTCAAGGAGAAGCGGATGAAACAGTAttt < 1:2155247/46‑1 (MQ=255) ccGCGAAAAAATAATTCTCAAGGAGAAGCGGATGAAACAGTAttt < 1:692369/45‑1 (MQ=255) ccGCGAAAAAATAATTCTCAAGGAGAAGCGGATGAAACAGTAttt < 1:2163168/45‑1 (MQ=255) ccGCGAAAAAATAATTCTCAAGGAGAAGCGGATGAAACAGTAttt < 1:2623249/45‑1 (MQ=255) gAAAAAATAATTCTCAAGGAGAAGCGGATGAAACAGTa < 1:733929/38‑1 (MQ=255) aataaataattcagctaagacactgcactggattaagatgaaaacgattgaagttgatgatg > 1:1551200‑M2/1‑8 (MQ=255) aaaaaTAATTCTCAAGGAGAAGCGGATGAAACAGTATTTg < 1:1276867/40‑1 (MQ=255) aaaaaTAATTCTCAAGGAGAAGCGGATGAAACAGTATTTg < 1:2367450/40‑1 (MQ=255) aaaaaTAATTCTCAAGGAGAAGCGGATGAAACAGTATTTg < 1:2532638/40‑1 (MQ=255) aaaaTAattcagctaagacactgcactggattaagatgaaaacgattgaagttgatgatgaactctacagc > 1:2329838‑M2/1‑6 (MQ=255) aaaaTAATTCTCAAGGAGAAGCGGATGAAACAGTATTTGATTGCCCCCTCAATTCTGt > 1:54536/1‑58 (MQ=255) aaaaTAATTCTCAAGGAGAAGCGGATGAAACAGTATTTGATTGCCCCCTCAATTCTGTCGGCTg < 1:509855/64‑1 (MQ=255) aaaaTAATTCTCAAGGAGAAGCGGATGAAACAGTATTTGATTGCCCCCTCAATTCTGTCGGCTg < 1:480187/64‑1 (MQ=255) aaaaTAATTCTCAAGGAGAAGCGGATGAAACAGTATTTGATTGCCCCCTCAATTCTGTCGGCTGATTTTGc > 1:1721132/1‑71 (MQ=255) aaaaTAATTCTCAAGGAGAAGCGGATGAAACAGTATTTGATTGCCCCCTCAATTCTGTCGGCTGATTTTGc > 1:1850651/1‑71 (MQ=255) aaaaTAATTCTCAAGGAGAAGCGGATGAAACAGTATTTGATTGCCCCCTCAATTCTGTCGGCTGATTTTGc > 1:2423947/1‑71 (MQ=255) aaaaTAATTCTCAAGGAGAAGCGGATGAAACAGTATTTGATTGCCCCCTCAATTCTGTCGGATg < 1:745474/64‑1 (MQ=255) aataattcagctaagacactgcactggattaagatgaaaacgattgaagttgatgatgaactctacagcta > 1:410827‑M2/1‑4 (MQ=255) aataatTCTCAAGGAGAAGCGGATGAAACAGTAttt < 1:741092/36‑1 (MQ=255) aataatTCTCAAGGAGAAGCGGATGAAACAGTAttt < 1:819813/36‑1 (MQ=255) taatTCTCAAGGAGAAGCGGATGAAACAGTATTTGa > 1:662112/1‑36 (MQ=255) taatTCTCAAGGAGAAGCGGATGAAACAGTATTTGa > 1:1346462/1‑36 (MQ=255) | CGTAAAAAGGTGGACGAACTGCTGGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAATTCTCAAGGAGAAGCGGATGAAACAGTATTTGATTGCCCCCTCAATTCTGTCGGCTGATTTTGCCC > W3110S.gb/4125276‑4125407 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |