Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | W3110S.gb | 2,286,571 | G→A | G237G (GGC→GGT) | yejK ← | nucleotide associated protein |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | W3110S.gb | 2,286,571 | 0 | G | A | 99.7% | 664.4 / ‑6.5 | 323 | G237G (GGC→GGT) | yejK | nucleotide associated protein |
Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (321/0); minor base T (1/0); total (323/0) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 |
Only 100 of 323 total aligned reads displayed.
TTCGATCTCTTCGCCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGT > W3110S.gb/2286559‑2286620 | ttCAATCTCTTCTCCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:479699/1‑62 (MQ=255) ttCAATCTCTTCCCCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:270559/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAg > 1:605733/1‑40 (MQ=37) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATaaa > 1:420727/1‑47 (MQ=38) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGgc > 1:220256/1‑56 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACg > 1:702757/1‑61 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACg > 1:641152/1‑61 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:493540/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:546720/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:544794/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:533998/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:5251/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:518416/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:512409/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:509198/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:501480/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:497717/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:585888/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:490332/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:484482/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:477121/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:4760/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:472042/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:457309/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:450836/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:44756/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:439132/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:43636/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:662577/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:92562/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:76276/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:73724/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:713067/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:704388/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:700020/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:689288/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:682390/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:67743/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:669941/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:559394/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:658890/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:651538/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:649213/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:62245/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:613493/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:601730/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:597969/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:590318/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:430565/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:568131/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:197930/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:100763/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:26192/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:255624/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:253198/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:246847/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:243138/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:239523/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:227596/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:226098/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:205163/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:200334/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:275611/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:188267/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:183712/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:165057/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:154170/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:151974/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:144668/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:139404/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:123632/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:117204/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:110822/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:107677/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:360248/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:425004/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:415855/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:411377/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:404204/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:400673/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:388971/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:385393/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:372781/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:369562/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:36766/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:284486/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:356798/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:351676/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:341854/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:335556/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:331592/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:328448/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:310757/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:303149/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:299341/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:28996/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCAAGt > 1:614738/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCAGCTGCTCAGTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:81988/1‑62 (MQ=255) ttCAATCTCTTCACCTGCCTGCACCTGCTCATTACAGTAGCAATAAACCTGCTGGCGCACGt > 1:555483/1‑62 (MQ=38) ttCAATCTCTTCACCTGCCTCCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt > 1:363592/1‑62 (MQ=255) | TTCGATCTCTTCGCCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGT > W3110S.gb/2286559‑2286620 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |