Predicted mutation
evidence seq id position mutation annotation gene description
RA W3110S.gb 2,830,697 C→A G83G (GGG→GGT norR ← DNA‑binding transcriptional activator

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*W3110S.gb2,830,6970CA99.6% 944.1 / NA 499G83G (GGG→GGTnorRDNA‑binding transcriptional activator
Reads supporting (aligned to +/- strand):  ref base C (0/2);  new base A (0/497);  total (0/499)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 499 total aligned reads displayed.

GTCTGCGGGAAAGCGCACCACATCCCCGGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTC  >  W3110S.gb/2830673‑2830735
                        |                                      
   tGCTGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:204356/60‑1 (MQ=255)
   tGCGGGAAAGCGCTCAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:155156/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:281669/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:320524/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:319301/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:312943/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:309213/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:306809/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:300255/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:297682/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:293994/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:290348/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:28644/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:282732/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:321855/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:280163/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:273305/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:268924/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:268341/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:263378/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:258155/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:25424/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:251317/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:247498/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:244888/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:100836/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:53272/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:95426/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:93717/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:9051/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:8462/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:78845/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:73563/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:7155/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:68289/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:65923/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:62862/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:58152/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:242583/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:49564/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:47311/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:42702/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:3866/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:37210/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:345003/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:338425/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:336775/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:333132/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:330448/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:324509/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:126165/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:167818/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:152983/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:14943/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:145826/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:143829/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:141470/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:136287/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:134522/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:132471/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:129224/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:127350/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:236229/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:124505/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:118524/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:116975/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:114561/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:110756/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:109716/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:107131/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:104453/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:10399/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:102896/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:203665/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:239667/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:235093/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:232407/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:229890/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:225721/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:222587/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:216630/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:212533/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:209413/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:206194/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:169918/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:2026/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:198607/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:191941/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:189248/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:186833/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:183160/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:179603/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:177021/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:174212/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGACGCCCTTc  <  1:87603/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCGTCCAGCCGTGGATGCCCTTc  <  1:162979/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCACTTCCAGCCGGGGATGCCCTTc  <  1:27722/60‑1 (MQ=255)
   tGCGGGAAAGCGCACAACATCACCCGCGCGGGCAAGCGCTTCCAGCCGTGGATGCCCTTc  <  1:12087/60‑1 (MQ=255)
   tGCGGGAAACCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc  <  1:315258/60‑1 (MQ=255)
    gCGGGAAAGCGCACAACATCACCCGCGCGGGCAATCGCTTCCAGCCGTGGATCCCCTTc  <  1:158489/59‑1 (MQ=255)
                        |                                      
GTCTGCGGGAAAGCGCACCACATCCCCGGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTC  >  W3110S.gb/2830673‑2830735

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: