| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | W3110S.gb | 2,517,361 | G→A | S264S (TCC→TCT) | mntH ← | manganese/divalent cation transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | W3110S.gb | 2,517,361 | 0 | G | A | 99.0% | 480.6 / ‑5.6 | 203 | S264S (TCC→TCT) | mntH | manganese/divalent cation transporter |
| Reads supporting (aligned to +/- strand): ref base G (0/2); new base A (0/200); total (0/203) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.57e-01 | |||||||||||
Only 100 of 203 total aligned reads displayed.
ACACCAGTATGACCGGAAAAGTGGAACGCCGCCGCAG > W3110S.gb/2517347‑2517383 | acacCAGTATGACCAGAAAGGTGGAACGCCGCCGCAg < 1:1019941/37‑1 (MQ=38)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:590747/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:699007/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:695954/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:687438/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:679465/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:660459/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:65639/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:642683/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:629155/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:625426/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:619634/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:607757/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:603583/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:709715/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:582376/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:577032/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:566522/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:56249/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:558880/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:553544/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:544479/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:540030/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:1002781/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:510834/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:816661/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:991044/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:976996/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:966680/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:947175/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:945192/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:932199/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:909603/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:891052/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:886606/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:85484/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:846751/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:522121/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:806358/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:797675/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:780639/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:772346/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:760256/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:750810/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:748790/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:743845/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:729835/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:714240/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:218502/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:312450/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:306052/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:505879/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:298738/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:292728/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:284484/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:272274/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:254592/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:241209/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:230768/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:227886/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:300304/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:203528/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:190759/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:184263/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:178271/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:129014/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:119478/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:1037605/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:1033112/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:1025123/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:1011205/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:1006208/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:329567/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:485958/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:479842/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:468251/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:467120/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:461256/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:4498/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:44898/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:444709/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:441012/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:434201/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:42968/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:425977/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:42286/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:412033/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:404216/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:381224/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:362095/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:350806/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:333814/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:319124/37‑1 (MQ=255)acacCAGTATGACCAGAAAAGGGGAACGCCGCCGCAg < 1:526901/37‑1 (MQ=38)acacCAGTATGAACAGAAAAGTGGAACGCCGCCGCAg < 1:807752/37‑1 (MQ=38) cacCAGTATGACCGGAAAAGTGGAACGCCGCCGCAg < 1:728304/36‑1 (MQ=255) cacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:767142/36‑1 (MQ=255) cacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:387616/36‑1 (MQ=255) cacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:164675/36‑1 (MQ=255) cacCAGTATGACCAGAAAAGTGGAACGCCGCCGCAg < 1:940154/36‑1 (MQ=255) | ACACCAGTATGACCGGAAAAGTGGAACGCCGCCGCAG > W3110S.gb/2517347‑2517383 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |