Missing coverage evidence... | ||||||||||
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seq id | start | end | size | ←reads | reads→ | gene | description | |||
* | * | ÷ | W3110S.gb | 3013914 | 3183126 | 169213 | 114 [0] | [0] 50 | [ygfJ]–ribB | [ygfJ],ygfK,ssnA,ygfM,xdhD,ygfO,guaD,ygfQ,ygfS,ygfT,ygfU,idi,lysS,prfB,prfB,recJ,dsbC,xerD,fldB,ygfX,ygfY,ygfZ,yqfA,yqfB,bglA,ygfF,gcvP,gcvH,gcvT,visC,ubiH,pepP,ygfB,zapA,ygfA,serA,rpiA,yqfE,argP,yliK,argK,ygfG,ygfH,ygfI,yggE,argO,mscS,fbaA,pgk,epd,yggC,yggD,yggF,yggP,cmtA,cmtB,tktA,yggG,speB,speA,yqgB,yqgC,yqgD,metK,galP,sprT,endA,yggJ,gshB,yqgE,yqgF,yggR,yggS,yggT,yggU,yggV,yggW,yggM,ansB,yggN,yggL,yggH,mutY,yggX,mltC,nupG,speC,yqgA,pheV,yghD,yghE,yghF,yghG,pppA,yghJ,yghK,glcB,glcG,glcF,glcE,glcD,glcC,yghO,insH,yghQ,yghR,yghS,yghT,pitB,gss,yghU,hybG,hybF,hybE,hybD,hybC,hybB,hybA,hybO,yghW,yghX,yghY,yghZ,yqhA,yghA,exbD,exbB,metC,yghB,yqhC,yqhD,dkgA,yqhG,yqhH,ygiQ,sufI,plsC,parC,ygiS,ygiT,ygiU,ygiV,ygiW,qseB,qseC,ygiZ,mdaB,ygiN,parE,yqiA,cpdA,yqiB,nudF,tolC,ygiA,ygiB,ygiC,zupT,ygiE,ribB |
AAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCATATA > W3110S.gb/3183127‑3183188 | aaaaaaCCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCAtata < 1:4746/62‑1 (MQ=255) aaaaaaCCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCAtata < 1:38400/62‑1 (MQ=255) aaaaaaCCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCAtata < 1:38690/62‑1 (MQ=255) aaaaaaCCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCAtata < 1:39258/62‑1 (MQ=255) aaaaaaCCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCAtata < 1:39438/62‑1 (MQ=255) aaaaaaCCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCAtata < 1:41695/62‑1 (MQ=255) aaaaaaCCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCAtata < 1:41786/62‑1 (MQ=255) aaaaaaCCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCAtata < 1:41790/62‑1 (MQ=255) aaaaaaCCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCAtata < 1:41797/62‑1 (MQ=255) aaaaaaCCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCAtata < 1:42429/62‑1 (MQ=255) aaaaaaCCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCAtata < 1:42520/62‑1 (MQ=255) aaaaaaCCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCAtata < 1:44262/62‑1 (MQ=255) aaaaaaCCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCAtata < 1:44370/62‑1 (MQ=255) aaaaaaCCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCAtata < 1:36789/62‑1 (MQ=255) aaaaaaCCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCAtata < 1:47594/62‑1 (MQ=255) aaaaaaCCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCAtata < 1:48271/62‑1 (MQ=255) aaaaaaCCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCAtata < 1:49829/62‑1 (MQ=255) aaaaaaCCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCAtata < 1:50796/62‑1 (MQ=255) aaaaaaCCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCAtata < 1:50815/62‑1 (MQ=255) aaaaaaCCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCAtata < 1:51123/62‑1 (MQ=255) aaaaaaCCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCAtata < 1:52753/62‑1 (MQ=255) aaaaaaCCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCAtata < 1:53497/62‑1 (MQ=255) aaaaaaCCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCAtata < 1:54195/62‑1 (MQ=255) aaaaaaCCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCAtata < 1:6169/62‑1 (MQ=255) aaaaaaCCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCAtata < 1:985/62‑1 (MQ=255) aaaaaaCCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCAtata < 1:18212/62‑1 (MQ=255) aaaaaaCCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCAtata < 1:10932/62‑1 (MQ=255) aaaaaaCCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCAtata < 1:11279/62‑1 (MQ=255) aaaaaaCCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCAtata < 1:11406/62‑1 (MQ=255) aaaaaaCCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCAtata < 1:11803/62‑1 (MQ=255) aaaaaaCCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCAtata < 1:12051/62‑1 (MQ=255) aaaaaaCCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCAtata < 1:13139/62‑1 (MQ=255) aaaaaaCCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCAtata < 1:13259/62‑1 (MQ=255) aaaaaaCCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCAtata < 1:15859/62‑1 (MQ=255) aaaaaaCCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCAtata < 1:1640/62‑1 (MQ=255) aaaaaaCCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCAtata < 1:16485/62‑1 (MQ=255) aaaaaaCCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCAtata < 1:17616/62‑1 (MQ=255) aaaaaaCCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCAtata < 1:17655/62‑1 (MQ=255) aaaaaaCCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCAtata < 1:10415/62‑1 (MQ=255) aaaaaaCCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCAtata < 1:18371/62‑1 (MQ=255) aaaaaaCCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCAtata < 1:18650/62‑1 (MQ=255) aaaaaaCCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCAtata < 1:20837/62‑1 (MQ=255) aaaaaaCCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCAtata < 1:2169/62‑1 (MQ=255) aaaaaaCCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCAtata < 1:21949/62‑1 (MQ=255) aaaaaaCCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCAtata < 1:23368/62‑1 (MQ=255) aaaaaaCCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCAtata < 1:300/62‑1 (MQ=255) aaaaaaCCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCAtata < 1:31289/62‑1 (MQ=255) aaaaaaCCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCAtata < 1:32654/62‑1 (MQ=255) aaaaaaCCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCAtata < 1:34196/62‑1 (MQ=255) aaaaaaCCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCAtata < 1:35270/62‑1 (MQ=255) | AAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCATATA > W3110S.gb/3183127‑3183188 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |