Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3313470	3356829	43360	3 [0]	[0] 58	[infB]–[gltB]	[infB],nusA,yhbC,metY,argG,yhbX,leuU,secG,glmM,folP,ftsH,rrmJ,yhbY,greA,dacB,obgE,yhbE,rpmA,rplU,ispB,sfsB,murA,yrbA,yrbB,yrbC,yrbD,yrbE,yrbF,yrbG,kdsD,kdsC,yrbK,yhbN,yhbG,rpoN,yhbH,ptsN,yhbJ,npr,yrbL,mtgA,elbB,arcB,yhcC,[gltB]

CGCATTGGTGGAGCAAGCTTTGAAGACTTCCAGCAGGATCTGCTGAATCTGTCGAAACGTG  >  W3110S.gb/3356830‑3356890 |                                                             cGCATTGGCTGGGCGAGCTTTGAAGACTTCCAGCAGGATCTGCTGAATCTGTCGAAACGTg  <  1:5548/61‑1 (MQ=255) cGCATTGGCGGGGCGAGCTTTGAAGACTTCCAGCAGGATCTGCTGAATCTGTCGAAACGTg  <  1:50491/61‑1 (MQ=255) cGCATTGGCGGGGCGAGCTTTGAAGACTTCCAGCAGGATCTGCTGAATCTGTCGAAACGTg  <  1:37931/61‑1 (MQ=255) cGCATTGGCGGGGCGAGCTTTGAAGACTTCCAGCAGGATCTGCTGAATCTGTCGAAACGTg  <  1:38102/61‑1 (MQ=255) cGCATTGGCGGGGCGAGCTTTGAAGACTTCCAGCAGGATCTGCTGAATCTGTCGAAACGTg  <  1:39175/61‑1 (MQ=255) cGCATTGGCGGGGCGAGCTTTGAAGACTTCCAGCAGGATCTGCTGAATCTGTCGAAACGTg  <  1:40125/61‑1 (MQ=255) cGCATTGGCGGGGCGAGCTTTGAAGACTTCCAGCAGGATCTGCTGAATCTGTCGAAACGTg  <  1:40313/61‑1 (MQ=255) cGCATTGGCGGGGCGAGCTTTGAAGACTTCCAGCAGGATCTGCTGAATCTGTCGAAACGTg  <  1:41860/61‑1 (MQ=255) cGCATTGGCGGGGCGAGCTTTGAAGACTTCCAGCAGGATCTGCTGAATCTGTCGAAACGTg  <  1:42406/61‑1 (MQ=255) cGCATTGGCGGGGCGAGCTTTGAAGACTTCCAGCAGGATCTGCTGAATCTGTCGAAACGTg  <  1:42603/61‑1 (MQ=255) cGCATTGGCGGGGCGAGCTTTGAAGACTTCCAGCAGGATCTGCTGAATCTGTCGAAACGTg  <  1:46513/61‑1 (MQ=255) cGCATTGGCGGGGCGAGCTTTGAAGACTTCCAGCAGGATCTGCTGAATCTGTCGAAACGTg  <  1:46910/61‑1 (MQ=255) cGCATTGGCGGGGCGAGCTTTGAAGACTTCCAGCAGGATCTGCTGAATCTGTCGAAACGTg  <  1:47046/61‑1 (MQ=255) cGCATTGGCGGGGCGAGCTTTGAAGACTTCCAGCAGGATCTGCTGAATCTGTCGAAACGTg  <  1:49359/61‑1 (MQ=255) cGCATTGGCGGGGCGAGCTTTGAAGACTTCCAGCAGGATCTGCTGAATCTGTCGAAACGTg  <  1:49775/61‑1 (MQ=255) cGCATTGGCGGGGCGAGCTTTGAAGACTTCCAGCAGGATCTGCTGAATCTGTCGAAACGTg  <  1:50146/61‑1 (MQ=255) cGCATTGGCGGGGCGAGCTTTGAAGACTTCCAGCAGGATCTGCTGAATCTGTCGAAACGTg  <  1:37181/61‑1 (MQ=255) cGCATTGGCGGGGCGAGCTTTGAAGACTTCCAGCAGGATCTGCTGAATCTGTCGAAACGTg  <  1:50557/61‑1 (MQ=255) cGCATTGGCGGGGCGAGCTTTGAAGACTTCCAGCAGGATCTGCTGAATCTGTCGAAACGTg  <  1:50616/61‑1 (MQ=255) cGCATTGGCGGGGCGAGCTTTGAAGACTTCCAGCAGGATCTGCTGAATCTGTCGAAACGTg  <  1:50806/61‑1 (MQ=255) cGCATTGGCGGGGCGAGCTTTGAAGACTTCCAGCAGGATCTGCTGAATCTGTCGAAACGTg  <  1:50835/61‑1 (MQ=255) cGCATTGGCGGGGCGAGCTTTGAAGACTTCCAGCAGGATCTGCTGAATCTGTCGAAACGTg  <  1:52047/61‑1 (MQ=255) cGCATTGGCGGGGCGAGCTTTGAAGACTTCCAGCAGGATCTGCTGAATCTGTCGAAACGTg  <  1:5216/61‑1 (MQ=255) cGCATTGGCGGGGCGAGCTTTGAAGACTTCCAGCAGGATCTGCTGAATCTGTCGAAACGTg  <  1:52760/61‑1 (MQ=255) cGCATTGGCGGGGCGAGCTTTGAAGACTTCCAGCAGGATCTGCTGAATCTGTCGAAACGTg  <  1:53048/61‑1 (MQ=255) cGCATTGGCGGGGCGAGCTTTGAAGACTTCCAGCAGGATCTGCTGAATCTGTCGAAACGTg  <  1:53569/61‑1 (MQ=255) cGCATTGGCGGGGCGAGCTTTGAAGACTTCCAGCAGGATCTGCTGAATCTGTCGAAACGTg  <  1:7057/61‑1 (MQ=255) cGCATTGGCGGGGCGAGCTTTGAAGACTTCCAGCAGGATCTGCTGAATCTGTCGAAACGTg  <  1:8804/61‑1 (MQ=255) cGCATTGGCGGGGCGAGCTTTGAAGACTTCCAGCAGGATCTGCTGAATCTGTCGAAACGTg  <  1:9616/61‑1 (MQ=255) cGCATTGGCGGGGCGAGCTTTGAAGACTTCCAGCAGGATCTGCTGAATCTGTCGAAACGTg  <  1:25044/61‑1 (MQ=255) cGCATTGGCGGGGCGAGCTTTGAAGACTTCCAGCAGGATCTGCTGAATCTGTCGAAACGTg  <  1:12737/61‑1 (MQ=255) cGCATTGGCGGGGCGAGCTTTGAAGACTTCCAGCAGGATCTGCTGAATCTGTCGAAACGTg  <  1:13164/61‑1 (MQ=255) cGCATTGGCGGGGCGAGCTTTGAAGACTTCCAGCAGGATCTGCTGAATCTGTCGAAACGTg  <  1:14283/61‑1 (MQ=255) cGCATTGGCGGGGCGAGCTTTGAAGACTTCCAGCAGGATCTGCTGAATCTGTCGAAACGTg  <  1:14804/61‑1 (MQ=255) cGCATTGGCGGGGCGAGCTTTGAAGACTTCCAGCAGGATCTGCTGAATCTGTCGAAACGTg  <  1:15807/61‑1 (MQ=255) cGCATTGGCGGGGCGAGCTTTGAAGACTTCCAGCAGGATCTGCTGAATCTGTCGAAACGTg  <  1:18675/61‑1 (MQ=255) cGCATTGGCGGGGCGAGCTTTGAAGACTTCCAGCAGGATCTGCTGAATCTGTCGAAACGTg  <  1:18729/61‑1 (MQ=255) cGCATTGGCGGGGCGAGCTTTGAAGACTTCCAGCAGGATCTGCTGAATCTGTCGAAACGTg  <  1:19664/61‑1 (MQ=255) cGCATTGGCGGGGCGAGCTTTGAAGACTTCCAGCAGGATCTGCTGAATCTGTCGAAACGTg  <  1:20848/61‑1 (MQ=255) cGCATTGGCGGGGCGAGCTTTGAAGACTTCCAGCAGGATCTGCTGAATCTGTCGAAACGTg  <  1:21243/61‑1 (MQ=255) cGCATTGGCGGGGCGAGCTTTGAAGACTTCCAGCAGGATCTGCTGAATCTGTCGAAACGTg  <  1:21494/61‑1 (MQ=255) cGCATTGGCGGGGCGAGCTTTGAAGACTTCCAGCAGGATCTGCTGAATCTGTCGAAACGTg  <  1:22481/61‑1 (MQ=255) cGCATTGGCGGGGCGAGCTTTGAAGACTTCCAGCAGGATCTGCTGAATCTGTCGAAACGTg  <  1:22797/61‑1 (MQ=255) cGCATTGGCGGGGCGAGCTTTGAAGACTTCCAGCAGGATCTGCTGAATCTGTCGAAACGTg  <  1:12471/61‑1 (MQ=255) cGCATTGGCGGGGCGAGCTTTGAAGACTTCCAGCAGGATCTGCTGAATCTGTCGAAACGTg  <  1:25113/61‑1 (MQ=255) cGCATTGGCGGGGCGAGCTTTGAAGACTTCCAGCAGGATCTGCTGAATCTGTCGAAACGTg  <  1:28177/61‑1 (MQ=255) cGCATTGGCGGGGCGAGCTTTGAAGACTTCCAGCAGGATCTGCTGAATCTGTCGAAACGTg  <  1:2971/61‑1 (MQ=255) cGCATTGGCGGGGCGAGCTTTGAAGACTTCCAGCAGGATCTGCTGAATCTGTCGAAACGTg  <  1:29751/61‑1 (MQ=255) cGCATTGGCGGGGCGAGCTTTGAAGACTTCCAGCAGGATCTGCTGAATCTGTCGAAACGTg  <  1:31259/61‑1 (MQ=255) cGCATTGGCGGGGCGAGCTTTGAAGACTTCCAGCAGGATCTGCTGAATCTGTCGAAACGTg  <  1:31818/61‑1 (MQ=255) cGCATTGGCGGGGCGAGCTTTGAAGACTTCCAGCAGGATCTGCTGAATCTGTCGAAACGTg  <  1:3235/61‑1 (MQ=255) cGCATTGGCGGGGCGAGCTTTGAAGACTTCCAGCAGGATCTGCTGAATCTGTCGAAACGTg  <  1:3316/61‑1 (MQ=255) cGCATTGGCGGGGCGAGCTTTGAAGACTTCCAGCAGGATCTGCTGAATCTGTCGAAACGTg  <  1:33234/61‑1 (MQ=255) cGCATTGGCGGGGCGAGCTTTGAAGACTTCCAGCAGGATCTGCTGAATCTGTCGAAACGTg  <  1:3397/61‑1 (MQ=255) cGCATTGGCGGGGCGAGCTTTGAAGACTTCCAGCAGGATCTGCTGAATCTGTCGAAACGTg  <  1:34750/61‑1 (MQ=255) cGCATTGGCGGGGCGAGCTTTGAAGACTTCCAGCAGGATCTGCTGAATCTGTCGAAACGTg  <  1:3583/61‑1 (MQ=255) cGCATTGGCGGGGCGAGCTTTGAAGACTTCCAGCAGGATCTGCTGAATCTGTCGAAACGTg  <  1:36273/61‑1 (MQ=255) cGCATTGGCGGGGCGAGCTTTGAAGACTACCAGCAGGATCTGCTGAATCTGTCGAAACGTg  <  1:23764/61‑1 (MQ=255) |                                                             CGCATTGGTGGAGCAAGCTTTGAAGACTTCCAGCAGGATCTGCTGAATCTGTCGAAACGTG  >  W3110S.gb/3356830‑3356890

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑