| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 2992793 = | 70 (1.820) | 3 (0.080) | 3/94 | NT | 5.0% | pseudogene (97/375 nt) | pbl | ECK2852:JW5457:b2854; predicted peptidoglycan‑binding enzyme |
| ? | W3110S.gb | 2992812 = | 48 (1.330) | pseudogene (116/375 nt) | pbl | ECK2852:JW5457:b2854; predicted peptidoglycan‑binding enzyme | |||||
CTATCGCTCTTGTTGAAAGCAATCTAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTAAAAAAAC > W3110S.gb/2992728‑2992859 | cTATCGCTCTTGTTGAAAGCAATCTAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAatat > 1:2167661/1‑70 (MQ=255)cTATCGCTCTTGTTGAAAGCAATCTAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAAtata < 1:289091/71‑1 (MQ=255) tCGCTCTTGTTGAAAGCAATCTAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAag < 1:514061/71‑1 (MQ=255) cGCTCTTGTTGAAAGCAATCTAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATaaa > 1:1012267/1‑69 (MQ=255) cGCTCTTGTTGAAAGCAATCTAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATaaa > 1:3614331/1‑69 (MQ=255) cGCTCTTGTTGAAAGCAATCTAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAag < 1:1846441/70‑1 (MQ=255) gCTCTTGTTGAAAGCAATCTAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAagag > 1:3150255/1‑71 (MQ=255) gCTCTTGTTGAAAGCAATCTAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAagag > 1:2185680/1‑71 (MQ=255) gCTCTTGTTGAAAGCAATCTAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAagag > 1:3593839/1‑71 (MQ=255) ctTGTTGAAAGCAATCTAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAat > 1:3428451/1‑60 (MQ=255) ttgttgAAAGCAATCTAAAAAAGGATAGCTTAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGtt < 1:688718/69‑1 (MQ=255) ttgttgAAAGCAATCTAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGtt < 1:32515/69‑1 (MQ=255) ttgttgAAAGCAATCTAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGtt > 1:1134996/1‑69 (MQ=255) tgttgAAAGCAATCTAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGtt > 1:3382913/1‑68 (MQ=255) gttgAAAGCAATCTAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGtt > 1:2984146/1‑67 (MQ=255) gAAAGCAATCTAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGatta > 1:2333156/1‑71 (MQ=255) gAAAGCAATCTAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGatta > 1:266457/1‑71 (MQ=255) aaaGCAATCTAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGattat > 1:3490007/1‑71 (MQ=255) aaaGCAATCTAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGattat < 1:2410632/71‑1 (MQ=255) aaaGCAATCTAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGattat < 1:3048095/71‑1 (MQ=255) aaGCAATCTAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGattatt < 1:3557784/71‑1 (MQ=255) gCAATCTAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAagag < 1:2251469/58‑1 (MQ=255) gCAATCTAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTgg > 1:3182004/1‑71 (MQ=255) aaTCTAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGtt < 1:2984558/71‑1 (MQ=255) aTCTAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTa < 1:1911609/71‑1 (MQ=255) tAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAaga > 1:2302773/1‑51 (MQ=255) tAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAaga > 1:3329685/1‑51 (MQ=255) tAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAaga > 1:2474048/1‑51 (MQ=255) tAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGttt < 1:1142266/55‑1 (MQ=255) tAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGatta > 1:1025781/1‑61 (MQ=255) tAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGatta > 1:1723462/1‑61 (MQ=255) aaaaaGGATAGCATAGGCAAGAACAGAGATAAGAATAACAat > 1:158256/1‑42 (MQ=255) aaaaaGGATAGCATAGGCAAGAACAGAGATAAGAATAACAat > 1:2056456/1‑42 (MQ=255) aaaaaGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGtt > 1:1140641/1‑52 (MQ=255) aaaaaGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGattat > 1:2183978/1‑60 (MQ=255) aaaaaGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGattat > 1:3160306/1‑60 (MQ=255) aaaaaGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAAt < 1:3619574/68‑1 (MQ=255) aaaaaGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATg > 1:3383749/1‑69 (MQ=255) aaaaGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAg < 1:2581885/71‑1 (MQ=255) aaGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGattatt < 1:3451761/58‑1 (MQ=255) aatatgcatctggtttatctgcattaaccaatAATATAAAGAGTTTa > 1:1131663‑M1/33‑47 (MQ=255) aTAGCATAGGCAAGAACATAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAAc < 1:507774/71‑1 (MQ=255) tAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGat > 1:759714/1‑49 (MQ=255) gCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAAt > 1:767381/1‑58 (MQ=255) gCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAAt > 1:585136/1‑58 (MQ=255) gCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAg < 1:3420489/71‑1 (MQ=255) gCATAGGCAAGAAAAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAAt > 1:400465/1‑58 (MQ=255) tAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATa > 1:1414320/1‑62 (MQ=255) aGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTa < 1:2855422/40‑1 (MQ=255) aGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATg > 1:2690601/1‑70 (MQ=255) tctggtttatctgcattaaccaatAATATAAAGAGTTTAGa > 1:403947‑M1/25‑41 (MQ=255) gggaaGAACAGAGATAAGAATAAGAATATAAAGAGTTTAGATTATCGGTTAATGCAGATAAACCAGATGCa < 1:610298/68‑1 (MQ=255) ggCAAGAACAGAGATAAGAATAACAATATAAAGAGt > 1:867461/1‑36 (MQ=255) ggCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCa < 1:16164/71‑1 (MQ=255) ggCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCa < 1:1508213/71‑1 (MQ=255) ggCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCa > 1:578615/1‑71 (MQ=255) ggCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCa > 1:1706498/1‑71 (MQ=255) tggtttatctgcattaaccaatAATATAAAGAGTTTAGatt < 1:2384428‑M1/19‑1 (MQ=255) cAAGAACAGAGATAAGAATAACAATATAAAGAGTTTa < 1:362139/37‑1 (MQ=255) aGAACAGAGATGAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATa < 1:1044822/56‑1 (MQ=255) aGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATa < 1:2771915/56‑1 (MQ=255) gAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTc < 1:817289/71‑1 (MQ=255) gAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTc < 1:2678646/71‑1 (MQ=255) aaCAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCa > 1:550738/1‑50 (MQ=255) aaCAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACAAGATGCa < 1:1650814/65‑1 (MQ=255) aCAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCa < 1:1085299/64‑1 (MQ=255) cAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCata > 1:591031/1‑65 (MQ=255) cAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTcccc > 1:1694474/1‑71 (MQ=255) cAGAGATAAGAATAACAATATAAAGAGTCTAGatt < 1:477124/35‑1 (MQ=255) agagATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCa < 1:3005729/62‑1 (MQ=255) gagaTAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTc < 1:3612353/66‑1 (MQ=255) aTAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCata > 1:2955165/1‑60 (MQ=255) aaGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGa > 1:2175041/1‑43 (MQ=255) aaGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAAc > 1:2530605/1‑48 (MQ=255) aaGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTaa > 1:3049218/1‑70 (MQ=255) aGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTaaa > 1:3382989/1‑70 (MQ=255) aGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTa < 1:33057/68‑1 (MQ=255) tAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCata > 1:1047064/1‑53 (MQ=255) tAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCata > 1:1367890/1‑53 (MQ=255) tAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTaaaa > 1:2992074/1‑67 (MQ=255) tAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTAAAAAAAc > 1:2864789/1‑71 (MQ=255) aCAATATAAAGAGTTTAGATTATTGGTTAATGCAGATaa < 1:3407292/39‑1 (MQ=255) aCAATATAAAGAGTTTAGATTATTGGTTAATGCAGATaa < 1:832727/39‑1 (MQ=255) aCAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAAcct > 1:54692/1‑42 (MQ=255) aCAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCa > 1:3676226/1‑43 (MQ=255) aCAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCata > 1:2865101/1‑51 (MQ=255) cAATATAAAGAGTTTAGATTATTGGTTAATGCAGATaa < 1:2545513/38‑1 (MQ=255) AATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAAc < 1:3531966‑M1/39‑1 (MQ=255) | CTATCGCTCTTGTTGAAAGCAATCTAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTAAAAAAAC > W3110S.gb/2992728‑2992859 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |