| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 2564137 = | 11 (0.200) | 13 (0.280) +ATGCGGT |
7/86 | NT | 32.2% | coding (1404/1404 nt) | eutA | reactivating factor for ethanolamine ammonia lyase |
| ? | W3110S.gb | = 3997968 | 53 (0.980) | coding (684/753 nt) | yhiQ | predicted SAM‑dependent methyltransferase | |||||
TCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGT > W3110S.gb/2564070‑2564207 | tctTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCag > 1:591767/1‑71 (MQ=255)tctTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCag > 1:1888467/1‑71 (MQ=255) ctTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCag > 1:3689954/1‑70 (MQ=255) ctTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCag > 1:1279369/1‑70 (MQ=255) ctTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCag > 1:3699991/1‑70 (MQ=255) ctTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCag > 1:5061524/1‑70 (MQ=255) ttttACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCagg > 1:3472615/1‑70 (MQ=255) ttttACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCagg > 1:2307840/1‑70 (MQ=255) ttACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCagga < 1:3627265/69‑1 (MQ=255) ttACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCagg > 1:1171096/1‑68 (MQ=255) ttACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCagg > 1:2262580/1‑68 (MQ=255) ttACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCagg > 1:4026142/1‑68 (MQ=255) ttACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCagg > 1:4117346/1‑68 (MQ=255) ttACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCagg > 1:5184999/1‑68 (MQ=255) ttACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCagg > 1:126286/1‑68 (MQ=255) ttACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAATTTCATAAGTCGTTCCCTCagg < 1:3866054/68‑1 (MQ=255) aCATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCaggaaga < 1:2991991/70‑2 (MQ=255) cATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCaggaaga < 1:786951/69‑2 (MQ=255) tCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCaggaagaat > 1:2086777/1‑66 (MQ=255) aaaCTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCaggaa > 1:241059/1‑60 (MQ=255) taCATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCagtaagaa < 1:3333968/54‑3 (MQ=255) cATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCaggaaga > 1:5163015/1‑50 (MQ=255) cATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCaggaaga > 1:2290003/1‑50 (MQ=255) cATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCaggaaga > 1:2470689/1‑50 (MQ=255) aTTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCaggaa > 1:6029/1‑48 (MQ=255) ttGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCt < 1:4603272/41‑1 (MQ=255) ttGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCt < 1:3427709/41‑1 (MQ=255) gCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCa > 1:1352547/1‑41 (MQ=255) aTGTGGTCTTTAGTTTCATAAGTCGTTCCCTCaggaaga > 1:4414304/1‑38 (MQ=255) ccagcgccaccgctggcgaataccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAAcc < 1:865374‑M1/43‑1 (MQ=255) agcgccaccgctggcgaataccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGa < 1:1165190‑M1/45‑1 (MQ=255) agcgccaccgctggcgaataccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGa > 1:3648657‑M1/27‑71 (MQ=255) gcgccaccgctggcgaataccgcatTCAGGAAGGAAATGCGAGTGa > 1:2524850‑M1/26‑46 (MQ=255) gccaccgctggcgaataccgcatTCAGGAAGGAAATGCGAGTGATTtcac < 1:3186625‑M1/27‑1 (MQ=255) gccaccgctggcgaataccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATcc < 1:897414‑M1/48‑1 (MQ=255) ccgctggcgaataccgcatTCAGGAAGGAAATGCGAGTGAtt < 1:3022317‑M1/23‑1 (MQ=255) ccgctggcgaataccgcatTCAGGAAGGAAATGCGAGTGAtt < 1:2841070‑M1/23‑1 (MQ=255) ccgctggcgaataccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAAc < 1:2183313‑M1/42‑1 (MQ=255) cgctggcgaataccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCa < 1:4189599‑M1/52‑1 (MQ=255) gctggcgaataccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCaa < 1:3907708‑M1/53‑1 (MQ=255) gcgaataccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCaaaaa > 1:3193052‑M1/14‑69 (MQ=255) gcgaataccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCaaaaa > 1:318518‑M1/14‑69 (MQ=255) cgaataccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAagag > 1:1208644‑M1/13‑71 (MQ=255) gaataccgcatTCAGGAAGGAAATGTGAGTGATTTCACCGTCACCGGCACAACCGATcc < 1:3904974‑M1/48‑1 (MQ=255) gaataccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAgg < 1:1795252‑M1/60‑1 (MQ=255) aataccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGa > 1:508394‑M1/11‑55 (MQ=255) ataccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCgg < 1:2264215‑M1/36‑1 (MQ=255) ataccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGc < 1:2393401‑M1/37‑1 (MQ=255) ataccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCC‑CCAAAAAGAGGCg < 1:4083360‑M1/61‑1 (MQ=255) taccgcatTCAGGAAGGAAATGCGAGTGCTTTCACCGTCACCGGCACAACCGATcc < 1:1804694‑M1/48‑1 (MQ=255) taccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGcac > 1:4508016‑M1/9‑47 (MQ=255) taccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCg < 1:3670822‑M1/44‑1 (MQ=255) cgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTAcc > 1:1960839‑M1/6‑71 (MQ=255) gcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTAcc < 1:212881‑M1/66‑1 (MQ=255) gcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTAcc < 1:4020096‑M1/66‑1 (MQ=255) tTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACGACCGATCCGCCaaa > 1:3984907‑M1/2‑55 (MQ=255) tTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCaaa > 1:2205092‑M1/2‑55 (MQ=255) tTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATg < 1:4148096‑M1/70‑1 (MQ=255) tTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATg > 1:1317416‑M1/2‑71 (MQ=255) tCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGt > 1:4387919/1‑71 (MQ=255) tCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGt > 1:4138903/1‑71 (MQ=255) | TCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGT > W3110S.gb/2564070‑2564207 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |