| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 3261133 | 0 (0.000) | 49 (0.980) | 33/92 | NT | 100% | intergenic (‑59/‑69) | tdcE/insH | pyruvate formate‑lyase 4/2‑ketobutyrate formate‑lyase/IS5 element protein |
| ? | W3110S.gb | 3262333 = | 0 (0.000) | coding (1183/1296 nt) | tdcD | propionate kinase/acetate kinase C, anaerobic | |||||
TCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAACTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTTTCTTCGTTAGTCGGAATAACGGCACAAATGA > W3110S.gb/3262263‑3262401 | tctaccttcatgaaaaataatctctctacaatacttcaactaaattatgcaaattctgcgggcgcgttaac > 1:1100359‑M2/71‑71 (MQ=255) taccttcatgaaaaataatctctctacaatacttcaactaaattatgcaaattctgcgggcgcgttaaCtt > 1:283232‑M2/69‑71 (MQ=255) accttcatgaaaaataatctctctacaatacttcaactaaattatgcaaattctgcgggcgcgttaaCtt > 1:669816‑M2/68‑70 (MQ=255) ccttcatgaaaaataatctctctacaatacttcaactaaattatgcaaattctgcgggcgcgttaaCt < 1:3927438‑M2/2‑1 (MQ=255) ctacatgaaaaataatctctctacaatacttcaactaaattatgcaaattctgcgggcgcgttaaCTTTGc > 1:2227090‑M2/66‑71 (MQ=255) tcatgaaaaataatctctctacaatacttcaactaaattatgcaaattctgcgggcgcgttaaCTTTGcc > 1:3943871‑M2/64‑70 (MQ=255) tcatgaaaaataatctctctacaatacttcaactaaattatgcaaattctgcgggcgcgttaaCTTTGcc > 1:2599446‑M2/64‑70 (MQ=255) tgaaaaataatctctctacaatacttcaactaaattatgcaaattctgcgggcgcgttaaCTTTGCCTaaa < 1:4678280‑M2/11‑1 (MQ=255) aaaaataatctctctacaatacttcaactaaattatgcaaattctgcgggcgcgttaaCTTTGCCTAaat > 1:633727‑M2/59‑70 (MQ=255) aaaaataatctctctacaatacttcaactaaattatgcaaattctgcgggcgcgttaaCTTTGCCTAaat < 1:3829077‑M2/12‑1 (MQ=255) aaaataatctctctacaatacttcaactaaattatgcaaattctgcgggcgcgttaaCTTTGCCTAaatg < 1:653201‑M2/13‑1 (MQ=255) aataatctctctacaatacttcaactaaattatgcaaattctgcgggcgcgttaaCTTTGCCTAaatgaat < 1:4194618‑M2/16‑1 (MQ=255) aataatctctctacaatacttcaactaaattatgcaaattctgcgggcgcgttaaCTTTGCCTAaatgaat < 1:1512113‑M2/16‑1 (MQ=255) ataatctctctacaatacttcaactaaattatgcaaattctgcgggcgcgttaaCTTTGCCTAaatgaatg < 1:3367711‑M2/17‑1 (MQ=255) tctctctacaatacttcaactaaattatgcaaattctgcgggcgcgttaaCTTTGCCTAAATGAATGGc < 1:3925311‑M2/19‑1 (MQ=255) tctctctacaatacttcaactaaattatgcaaattctgcgggcgcgttaaCTTTGCCTAAATGAATGGCAt > 1:563517‑M2/51‑71 (MQ=255) tctctctacaatacttcaactaaattatgcaaattctgcgggcgcgttaaCTTTGCCTAAATGAATGGCAt > 1:4136823‑M2/51‑71 (MQ=255) tctctacaatacttcaactaaattatgcaaattctgcgggcgcgttaaCTTTGCCTAAATGAATgg < 1:4310286‑M2/18‑1 (MQ=255) tctctacaatacttcaactaaattatgcaaattctgcgggcgcgttaaCTTTGCCTAAATGAATgg < 1:846967‑M2/18‑1 (MQ=255) ctctacaatacttcaactaaattatgcaaattctgcgggcgcgttaaCTTTGCCTAAATGAATGGCATcc > 1:1658469‑M2/48‑70 (MQ=255) tctacaatacttcaactaaattatgcaaattctgcgggcgcgttaaCTTTGCCTAAATGAATGGCATc < 1:4124112‑M2/22‑1 (MQ=255) tacaatacttcaactaaattatgcaaattctgcgggcgcgttaaCtt > 1:4691107‑M2/45‑47 (MQ=255) tacaatacttcaactaaattatgcaaattctgcgggcgcgttaaCtt > 1:4398764‑M2/45‑47 (MQ=255) tacaatacttcaactaaattatgcaaattctgcgggcgcgttaaCTTTGCCTAaatgaa > 1:1321878‑M2/45‑59 (MQ=255) tacaatacttcaactaaattatgcaaattctgcgggcgcgttaaCTTTGCCTAaatga > 1:1044994‑M2/45‑58 (MQ=255) tacaatacttcaactaaattatgcaaattctgcgggcgcgttaaCTTTGCCTAAATGAATGGCATCCaa > 1:153533‑M2/45‑69 (MQ=255) tacaatacttcaactaaattatgcaaattctgcgggcgcgttaaCTTTGCCTAAATGAATGGCATCCa < 1:4415288‑M2/24‑1 (MQ=255) tacaatacttcaactaaattatgcaaattctgcgggcgcgttaaCTTTGCCTAAATGAATGGCATCCAAAg > 1:1688787‑M2/45‑71 (MQ=255) aatacttcaactaaattatgcaaattctgcgggcgcgttaaCttt > 1:494191‑M2/42‑45 (MQ=255) atacttcaactaaattatgcaaattctgcgggcgcgttaaCTTTGCCTAaatgaat > 1:4156038‑M2/41‑56 (MQ=255) tacttcaactaaattatgcaaattctgcgggcgcgttaaCTTTGCCTAAATGAATGGCATCCAAAGCAATc < 1:2717468‑M2/32‑1 (MQ=255) cttcaactaaattatgcaaattctgcgggcgcgttaaCttt < 1:4188201‑M2/4‑1 (MQ=255) tcaactaaattatgcaaattctgcgggcgcgttaaCTTTGCCTAAATAAATGGCATCCAAAGCAATCAttt > 1:1392290‑M2/36‑71 (MQ=255) caactaaattatgcaaattctgcgggcgcgttaaCTTTGCCTAAATGAATGGCATCCAAAGCAATCAtt < 1:4177826‑M2/35‑1 (MQ=255) aactaaattatgcaaattctgcgggcgcgttaaCttt < 1:3070254‑M2/4‑1 (MQ=255) aactaaattatgcaaattctgcgggcgcgttaaCTTTGCCTAAATGAATGGCATCCAAAGCAATCAttttt < 1:2864516‑M2/38‑1 (MQ=255) ctaaattatgcaaattctgcgggcgcgttaaCTTTGCCTAaatg < 1:1223162‑M2/13‑1 (MQ=255) taaattatgcaaattctgcgggcgcgttaaCTTTGCCTAaat < 1:3022247‑M2/12‑1 (MQ=255) taaattatgcaaattctgcgggcgcgttaaCTTTGCCTAAATGAATGGCATCCAAAGCAATCAtttt < 1:3970249‑M2/37‑1 (MQ=255) attatgcaaattctgcgggcgcgttaaCTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTttcttc < 1:3735904‑M2/43‑1 (MQ=255) attatgcaaattctgcgggcgcgttaaCTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTTTCTTCg < 1:3095213‑M2/44‑1 (MQ=255) ttatgcaaattctgcgggcgcgttaaCTTTGCCTAAATGAATGGCATCCAAAGCAATc > 1:1951396‑M2/27‑58 (MQ=255) atgcaaattctgcgggcgcgttaaCTTTGCCTAAATGAATGGCATCCAAAGCa < 1:3149831‑M2/29‑1 (MQ=255) caaattctgcgggcgcgttaaCTTTGCCTAaatgaa > 1:2667404‑M2/22‑36 (MQ=255) caaattctgcgggcgcgttaaCTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTTTCTTCGTTAGt < 1:1058831‑M2/49‑1 (MQ=255) aaattctgcgggcgcgttaaCTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTTTCTTCGTTAGTCg > 1:4016812‑M2/21‑71 (MQ=255) attctgcgggcgcgttaaCTTTGCCTAAATGAATGGCATCCAAAGCAATCAtttt < 1:4551912‑M2/37‑1 (MQ=255) attctgcgggcgcgttaaCTTTGCCTAAATGAATGGCATCCAAAGCAATCAtttt < 1:4362593‑M2/37‑1 (MQ=255) ttctgcgggcgcgttaaCTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTTTCTTCGTTAGTCGGa > 1:3992393‑M2/18‑70 (MQ=255) tctgcgggcgcgttaaCTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTTTCTTCGTTAg > 1:2362616‑M2/17‑64 (MQ=255) tctgcgggcgcgttaaCTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTTTCTTCGTTAGTCGGaa > 1:4510919‑M2/17‑70 (MQ=255) tctgagggcgcgttaaCTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTttc > 1:213079‑M2/17‑56 (MQ=255) ctgcgggcgcgttaaCTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTTTCTTCGTTAGTCGGAAt < 1:690838‑M2/55‑1 (MQ=255) ctgcgggcgcgttaaCTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTTTCTTCGTTAGTCGGAAt < 1:2253835‑M2/55‑1 (MQ=255) ctgcgggcgcgttaaCTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTTTCTTCGTTAGTCGGAAt > 1:5077004‑M2/16‑70 (MQ=255) ctgcgggcgcgttaaCTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTTTCTTCGTTAGTCGGAAt > 1:2653324‑M2/16‑70 (MQ=255) cgggcgcgttaaCTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTTTCTTCGTTAGTCGGAATaa < 1:4115018‑M2/57‑1 (MQ=255) ggcgcgttaaCTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTTTCTTCGTTAGTCGGAATAACgg > 1:1396122‑M2/11‑70 (MQ=255) gcgcgttaaCTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTTTCTTCGTTAGTCGGaa > 1:2830563‑M2/10‑63 (MQ=255) cgcgttaaCTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTTTCTTCGt > 1:2156039‑M2/9‑53 (MQ=255) ttaaCTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTttcttc < 1:1868220‑M2/43‑1 (MQ=255) ttaaCTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTttctt < 1:2477145‑M2/42‑1 (MQ=255) ttaaCTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTTTCTTCGt < 1:383463‑M2/45‑1 (MQ=255) ttaaCTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTTTCTTCGTTAGTCgg < 1:4405268‑M2/52‑1 (MQ=255) ttaaCTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTTTCTTCGTTAGTCGGAATAACGGCACAAAt < 1:332167‑M2/67‑1 (MQ=255) ttaaCTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTTTCTTCGTTAGTCGGAATAACGGCACAAAt < 1:2366134‑M2/67‑1 (MQ=255) taaCTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTttc > 1:1753547‑M2/4‑43 (MQ=255) taaCTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTttc > 1:156060‑M2/4‑43 (MQ=255) taaCTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTTTCTTCGTTAgta > 1:4335651‑M2/4‑52 (MQ=255) taaCTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTTTCTTCGTTAGTCGGAATAACGGCACAAAt > 1:4533845‑M2/4‑70 (MQ=255) aaCTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTTTCTTCGTTAGt > 1:1634569‑M2/3‑51 (MQ=255) aaCTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTTTCTTCGTTAGTCGGAATAACGGCACAAATg > 1:4185608‑M2/3‑70 (MQ=255) aaCTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTTTCTTCGTTAGTCGGAATAACGGCACAAATg < 1:3972644‑M2/68‑1 (MQ=255) aaCTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTTTCTTCGTTAGTCGGAATAACGGCACAAATGa > 1:1258684‑M2/3‑71 (MQ=255) cTTTGCCTAAATGAATGGCATCCAAAGCAATCAtttt < 1:1594366/37‑1 (MQ=255) cTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTTTCTTCGTTAGTCGGAATAACGGcac < 1:4608609/63‑1 (MQ=255) cTTTGCATAAATGAATGGCATCCAAAGCAATCATTTTTTCTTCGTTAGTCGGAATAACGGcac < 1:1465809/63‑1 (MQ=255) | TCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAACTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTTTCTTCGTTAGTCGGAATAACGGCACAAATGA > W3110S.gb/3262263‑3262401 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |